Job Description D6W196 Confidence 99.98% Date Mon Jul 2 19:10:02 BST 2012 Rank 2 Aligned Residues 232 % Identity 16% Template c2lckA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:mitochondrial uncoupling protein 2; PDBTitle: structure of the mitochondrial uncoupling protein 2 determined by nmr2 molecular fragment replacement Resolution UNK

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		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	F	I	A	G	G	I	S	G	V	I	S	R	T	C	T	A	P	F	D	R	L	K	V	F	L	I	A	R	T	D	L	S	S	I	L	L	N	S	K	T	D	L	L	A	K	N	P	N	A	D	I	N	K	I	S	S	P	L	A	K	A	V	K	S	L	Y	R	Q	G	G	I	K	A	F	Y	V	G	N	G
Query Conservation
Alig confidence																																										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	F	L	G	A	G	T	A	A	C	I	A	D	L	I	T	F	P	L	D	T	A	K	V	R	L	Q	I	Q	G	E	S	Q	G	L	V	R	T	A	A	.	.	.	.	.	.	.	.	.	.	.	.	S	A	Q	Y	R	G	V	L	G	T	I	L	T	M	V	R	T	E	G	P	R	S	L	Y	N	G	L	V
Template Known Secondary structure																T	T										S	S			T	T			S						S	.	.	.	.	.	.	.	.	.	.	.	.		S	S		S																				S	S
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.													.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	V	I	K	V	F	P	E	S	S	I	K	F	G	S	F	E	V	T	K	K	I	M	T	K	L	E	G	C	R	D	T	K	D	L	S	K	F	S	T	Y	I	A	G	G	L	A	G	M	A	A	Q	F	S	V	Y	P	I	D	T	L	K	F	R	V	Q	C	A	P	L	D	T	K	L	K	G	N	N	L
Query Conservation
Alig confidence																											.	.	.	.	.
Template Conservation																											.	.	.	.	.
Template Sequence		A	G	L	Q	R	Q	M	S	F	A	S	V	R	I	G	L	Y	D	S	V	K	Q	F	Y	T	.	.	.	.	.	K	G	S	E	H	A	G	I	G	S	R	L	L	A	G	S	T	T	G	A	L	A	V	A	V	A	Q	P	T	D	V	V	K	V	R	F	Q	A	Q	A	R	A	G	G	G	R	R	Y	Q	S
Template Known Secondary structure														T	T	T										S	.	.	.	.	.				S	S																					S													S		S				S	S	S
Template Predicted Secondary structure																											.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.						.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	Q	T	A	K	D	M	F	R	E	G	G	G	Q	I	I	L	Q	R	C	H	S	R	Y	S	G	H	I	S	L	C	C	I	R	F	G	D	F	F	C	L	K	K	M	V	Y	C	Q	T	G	K	D	P	E	P	T	T	R	S	G	H	S	K	Q	P	G	C	T	S	N	G	C	I	Q	W	N	C	R	S
Query Conservation
Alig confidence																																																												.	.	.	.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.	.	.	.
Template Sequence		T	V	E	A	Y	K	T	I	A	R	E	E	G	I	R	G	L	W	K	G	T	S	P	N	V	A	R	N	A	I	V	N	C	A	E	L	V	T	Y	D	L	I	K	D	T	L	L	K	A	N	L	M	T	D	D	L	P	C	.	.	.	.	.	.	.	.	.	H	F	T	S	A	F	G	A	G	F	C	T	T
Template Known Secondary structure																																														T	T	T	T	T	T	S			S					.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.										.	.	.	220	.	.	.	.	.	.	.	.	.
		470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	C	C	L	S	N	Q	S	F	K	N	K	T	T	S	P	R	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	I	A	S	P	V	D	V	V	K	T	R	Y	M	N	S	A	L
Template Known Secondary structure															T	T			S
Template Predicted Secondary structure
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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