Job Description D6W196 Confidence 99.60% Date Mon Jul 2 19:10:02 BST 2012 Rank 38 Aligned Residues 148 % Identity 16% Template c2l2eA_ PDB info PDB header:metal binding protein Chain: A: PDB Molecule:calcium-binding protein ncs-1; PDBTitle: solution nmr structure of myristoylated ncs1p in apo form Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		13	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80						.	.	.	.	.	.
Predicted Secondary structure													.																																																										.	.	.	.	.
Query SS confidence													.																																																										.	.	.	.	.
Query Sequence		D	I	R	Y	A	C	L	F	K	E	L	.	D	V	K	G	N	G	Q	V	T	L	D	N	L	I	S	A	F	E	K	N	D	H	P	L	K	G	N	D	E	A	I	K	M	L	F	T	A	M	D	V	N	K	D	S	V	V	D	L	S	D	F	K	K	Y	A	S	N	.	.	.	.	.	A	E	S	Q	I	W
Query Conservation													.																																																										.	.	.	.	.
Alig confidence													.																					.																																					.	.	.	.	.
Template Conservation																																		.
Template Sequence		K	K	E	L	Q	Q	W	Y	K	G	F	F	K	D	C	P	S	G	H	L	N	K	S	E	F	Q	K	I	Y	K	Q	F	.	F	P	F	G	D	P	S	A	F	A	E	Y	V	F	N	V	F	D	A	D	K	N	G	Y	I	D	F	K	E	F	I	C	A	L	S	V	T	S	R	G	E	L	N	D	K	L	I
Template Known Secondary structure		S														S																		.				S															S	S	S	T	T												T	T	S	S		S		S
Template Predicted Secondary structure																																		.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	G	F	Q	R	I	D	L	D	H	D	G	K	I	G	I	N	E	I	N	R	Y	L	S	D	L	D	N	Q	S	I	C	N	N	E	L	N	H	E	L	S	N	E	K	V	N	K	F	S	R	F	F	E	W	A	F	P	K	R	K	A	N	I	A	L	R	G	Q	A	S	H	K	K	N	T	D	N	D	R	S
Query Conservation
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		W	A	F	Q	L	Y	D	L	D	N	N	G	L	I	S	Y	D	E	M	L	R	I	V	D	A	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	K	M	V	G	S	M	V	K	L	P	E	D	E	D	T	P	E	K	R	V	N	K	I	F	N
Template Known Secondary structure									T	T	S		S		B													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								S				S	S				T
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.																													.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K	T	T	D	S	D	L	Y	V	T	Y	D	Q	W	R	D	F	L	L	L	V	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	M	D	K	N	K	D	G	Q	L	T	L	E	E	F	C	E	G	S	K	R	D	P
Template Known Secondary structure				T			S	S			B											T		T
Template Predicted Secondary structure
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions