 |
| Job Description | D6W196 | | Confidence | 95.50% | Date | Mon Jul 2 19:10:02 BST 2012 |
| Rank | 227 | Aligned Residues | 54 |
| % Identity | 22% | Template | c2kq6A_ |
| PDB info |
PDB header:transport protein | Chain: A: PDB Molecule:polycystin-2; |
PDBTitle: the structure of the ef-hand domain of polycystin-2 suggests a2 mechanism for ca2+-dependent regulation of polycystin-2 channel3 activity
|
| Resolution | UNK |
|
|   |   |
27 | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . |
| Predicted Secondary structure |   |
|
|
|  |  |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
G | N | G | Q | V | T | L | D | N | L | I | S | A | F | E | K | N | D | H | P | L | K | G | N | D | E | A | I | K | M | L | F | T | A | M | D | V | N | K | D | S | V | V | D | L | S | D | F | K | K | Y | A | S | N | A | E | S | Q |
| Query Conservation |   |
  |
|
|   |
|
|   |   |
|
|   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |
|   |
|   |
|
|   |   |   |   |   |   |   |
|   |   |
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|   |   |   |
|   |
|
|
|   |
|   |   |
|
|   |   |
|
|
| . | . | . | . |
|   |
|
|   |
|   |
|   |
|
|
|   |
|
|
|
|   |
|
|
|   |
|
|
|
|
|   |   |
|
|
|   |
|
| Template Sequence |   |
G | G | G | K | L | N | F | D | E | L | R | Q | D | L | K | G | K | G | H | T | . |
. |
. |
. |
D | A | E | I | E | A | I | F | T | K | Y | D | Q | D | G | D | Q | E | L | T | E | H | E | H | Q | Q | M | R | D | D | L | E | K | E |
| Template Known Secondary structure |   |
| S | S |
|
|
|  |  |  |  |  |  |  |  |  |  | T | T |
|
| . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
| S | S | S | S | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
13 | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | |
|
|
|
. | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|