Job Description D6W196 Confidence 99.53% Date Mon Jul 2 19:10:02 BST 2012 Rank 57 Aligned Residues 142 % Identity 13% Template c2i7aA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:calpain 13; PDBTitle: domain iv of human calpain 13 Resolution 1.80 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	G	Q	V	T	L	D	N	L	I	S	A	F	E	K	N	D	H	P	L	K	G	N	D	E	A	I	K	M	L	F	T	A	M	D	V	N	K	D	S	V	V	D	L	S	D	F	K	K	Y	A	S	N	A	E	S	Q	I	W	N	G	F	Q	R	I	D	L	D	H	D	G	K	I	G	I	N	E	I	N	R
Query Conservation
Alig confidence																					.																																				.													.
Template Conservation																					.																																				.													.
Template Sequence		G	S	D	I	D	A	T	Q	L	Q	G	L	L	N	Q	E	L	L	D	.	M	F	S	L	D	E	C	R	S	L	V	A	L	M	E	L	K	V	N	G	R	L	D	Q	E	E	F	A	R	L	W	K	R	L	V	.	H	Y	Q	H	V	F	Q	K	V	Q	T	S	.	P	G	V	L	L	S	S	D	L	W	K
Template Known Secondary structure																					.																S	S		S	S																.											S	B	.	T	T	B			G	G	G
Template Predicted Secondary structure																					.																																				.													.
Template SS confidence
		513	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.		.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.		.	.	.	570	.	.	.	.	.	.	.	.		.	580	.	.	.	.	.	.	.	.	.
		108	.	110	.	.				.	.	.	.	.	.	.	120	.	.	.	.	.					.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.		.	.	.	.	.
Predicted Secondary structure							.	.	.														.	.	.	.																																																		.
Query SS confidence							.	.	.														.	.	.	.																																																		.
Query Sequence		Y	L	S	D	L	.	.	.	D	N	Q	S	I	C	N	N	E	L	N	H	E	.	.	.	.	L	S	N	E	K	V	N	K	F	S	R	F	F	E	W	A	F	P	K	R	K	A	N	I	A	L	R	G	Q	A	S	H	K	K	N	T	D	N	D	R	S	K	K	T	T	D	S	D	L	.	Y	V	T	Y	D
Query Conservation							.	.	.														.	.	.	.																																																		.
Alig confidence							.	.	.														.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	I	E	N	T	D	F	L	R	G	I	F	I	S	R	E	L	L	H	L	V	T	L	R	Y	S	D	S	V	G	R	V	S	F	P	S	L	V	C	F	L	M	R	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	M	A	K	T	F	R	N	L	S	K	D	G	K	G	L	Y	L	T	E	M
Template Known Secondary structure					T		G	G	G	T	T																S		T	T	S															.	.	.	.	.	.	.	.	.	.	.	.	.	.												S	S	S	S
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		595	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.															.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660
		180	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	W	R	D	F	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	W	M	S	L	V	M
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		661	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions