Job Description D6W196 Confidence 99.62% Date Mon Jul 2 19:10:02 BST 2012 Rank 31 Aligned Residues 180 % Identity 14% Template c2f33A_ PDB info PDB header:metal binding protein Chain: A: PDB Molecule:calbindin; PDBTitle: nmr solution structure of ca2+-loaded calbindin d28k Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.					.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.
Query SS confidence																																																			.	.	.	.
Query Sequence		L	K	N	C	E	T	D	K	Q	R	D	I	R	Y	A	C	L	F	K	E	L	D	V	K	G	N	G	Q	V	T	L	D	N	L	I	S	A	F	E	K	N	D	H	P	L	K	G	N	D	.	.	.	.	E	A	I	K	M	L	F	T	A	M	D	V	N	K	D	S	V	V	D	L	S	D	F	K	K	Y	A
Query Conservation																																																			.	.	.	.
Alig confidence											.	.	.																																						.	.	.	.
Template Conservation											.	.	.
Template Sequence		L	Q	S	S	L	I	T	A	S	.	.	.	Q	F	F	E	I	W	L	H	F	D	A	D	G	S	G	Y	L	E	G	K	E	L	Q	N	L	I	Q	E	L	L	Q	A	R	K	K	A	G	L	E	L	S	P	E	M	K	T	F	V	D	Q	Y	G	Q	R	D	D	G	K	I	G	I	V	E	L	A	H	V	L
Template Known Secondary structure		T	T	T	S						.	.	.											T	T		S	S	S	B		S																		T															T	T	G	G	G			B									T
Template Predicted Secondary structure											.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.				.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		79	80															.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.													.	.	.	.	130	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	S	Q	I	W	N	G	F	Q	R	I	D	L	D	H	D	G	K	I	G	I	N	E	I	N	R	Y	L	S	D	L	D	N	Q	S	I	C	N	N	E	L	N	H	E	.	.	.	.	.	.	.	.	.	.	.	.	L	S	N	E	K	V	N
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	T	E	E	N	F	L	L	L	F	R	C	Q	Q	L	K	S	C	E	E	F	M	K	T	W	R	K	Y	D	T	D	H	S	G	F	I	E	T	E	E	L	K	N	F	L	K	D	L	L	E	K	A	N	K	T	V	D	D	T	K	L	A	E	Y	T	D	L	M	L	K	L	F	D	S	N	N	D	G	K	L
Template Known Secondary structure		T	S		T	T						G	G	G	T	S	S										T	T	S	S	T	T	T		S	S	B																	T	S																		T		S	S	S	S	S		B
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	F	S	R	F	F	E	W	A	F	P	K	R	K	A	N	I	A	L	R	G	Q	A	S	H	K	K	N	T	D	N	D	R	S	K	K	T	T	D	S	D	L	Y	V	T	Y	D	Q	W	R	D	F	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	L	T	E	M	A	R	L	L	P	V	Q	E	N	F	L	L	K	F	Q	G	I	K	M	C	G	K	E	F	N	K	A	F	E	L	Y	D	Q	D	G	N	G	Y	I	D	E	N	E	L	D	A	L	L
Template Known Secondary structure										S		T	T	T		S							T																	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions