Job Description D6W196 Confidence 99.51% Date Mon Jul 2 19:10:02 BST 2012 Rank 58 Aligned Residues 138 % Identity 16% Template c2ccmB_ PDB info PDB header:signaling protein Chain: B: PDB Molecule:calexcitin; PDBTitle: x-ray structure of calexcitin from loligo pealeii at 1.8a Resolution 1.8 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50														.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																				.																												.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.																												.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		C	E	T	D	K	Q	R	D	I	R	Y	A	C	L	F	K	E	L	.	D	V	K	G	N	G	Q	V	T	L	D	N	L	I	S	A	F	E	K	N	D	H	P	L	K	G	N	.	.	.	.	.	.	.	.	.	.	.	.	.	D	E	A	I	K	M	L	F	T	A	M	D	V	N	K	D	S	V	V	D	L
Query Conservation																				.																												.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	Q	L	S	D	F	Q	R	N	K	I	L	R	V	F	N	T	F	Y	D	C	N	H	D	G	V	I	E	W	D	D	F	E	L	A	I	K	K	I	C	N	L	H	S	W	P	T	D	G	K	K	H	N	E	A	R	A	T	L	K	L	I	W	D	G	L	R	K	Y	A	D	E	N	E	D	E	Q	V	T	K
Template Known Secondary structure																			T	T		T	T		S	S																		T	T			T	T	S																							T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		72	.	.	.	.	.	.	.	80	.															.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	D	F	K	K	Y	A	S	N	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	S	Q	I	W	N	G	F	Q	R	I	D	L	D	H	D	G	K	I	G	I	N	E	I	N	R	Y	L	S	D	L	D	N	Q	S	I	C	N	N	E	L	N	H	E	L	S	N	E	K	V	N	K	F	S	R	F
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	E	W	L	K	M	W	A	E	C	V	K	S	V	E	K	G	E	S	L	P	E	W	L	T	K	Y	M	N	F	M	F	D	V	N	D	T	S	G	D	N	I	I	D	K	H	E	Y	S	T	V	Y	M	S	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																	T	T																				T	T		S	S	B											G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	E	W	A	F	P	K	R	K	A	N	I	A	L	R	G	Q	A	S	H	K	K	N	T	D	N	D	R	S	K	K	T	T	D	S	D	L	Y	V	T	Y	D	Q	W	R	D	F	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	I	P	K	S	D	C	D	A	A	F	D	T	L	S	D	G	G	K	T	M	V	T	R	E	I	F	A	R	L	W
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T														T	G	G	G	T	S			B
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																			139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions