Job Description D6W196 Confidence 99.48% Date Mon Jul 2 19:10:02 BST 2012 Rank 66 Aligned Residues 166 % Identity 17% Template c1qxpB_ PDB info PDB header:hydrolase chimera Chain: B: PDB Molecule:mu-like calpain; PDBTitle: crystal structure of a mu-like calpain Resolution 2.80 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Query SS confidence																																																																										.	.	.	.	.	.	.	.
Query Sequence		Q	R	D	I	R	Y	A	C	L	F	K	E	L	D	V	K	G	N	G	Q	V	T	L	D	N	L	I	S	A	F	E	K	N	D	H	P	L	K	G	N	D	E	A	I	K	M	L	F	T	A	M	D	V	N	K	D	S	V	V	D	L	S	D	F	K	K	Y	A	S	N	A	E	.	.	.	.	.	.	.	.
Query Conservation																																																																										.	.	.	.	.	.	.	.
Alig confidence																																				.	.																.																					.	.	.	.	.	.	.	.
Template Conservation																																				.	.																.
Template Sequence		N	R	I	R	N	Y	L	T	I	F	R	K	F	D	L	D	K	S	G	S	M	S	A	Y	E	M	R	M	A	I	E	A	A	G	.	.	F	K	L	P	C	Q	L	H	Q	V	I	V	A	R	F	.	A	D	D	E	L	I	I	D	F	D	N	F	V	R	C	L	V	R	L	E	I	L	F	K	I	F	K	Q
Template Known Secondary structure												G	G	G		S	S	S	S	S	B											T	T	T	T	.	.																.	S		S	S	S			B
Template Predicted Secondary structure																																				.	.																.
Template SS confidence
		604	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.			.	.	640	.	.	.	.	.	.	.	.	.	650	.	.		.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680
																																																								83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	Q	I	W	N	G	F	Q	R	I	D	L	D	H	D	G	K	I	G	I	N	E	I	N	R	Y
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	D	P	E	N	T	G	T	I	Q	L	D	L	I	S	W	L	S	F	S	V	L	M	H	Y	S	N	N	E	S	E	E	R	Q	F	R	K	L	F	V	Q	L	M	E	V	S	A	T	E	L	M	F	G	I	D	T	C	R	S	M	V	A	V	M	D	S	D	T	T	G	K	L	G	F	E	E	F	K	Y	L
Template Known Secondary structure				T	T			S																										T	T	T	T			S	S							S	T	T	T				S					T	T						S	S	S	S					S
Template Predicted Secondary structure
Template SS confidence
		681	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.						.	.	.	.	130	.	.	.	.	.	.	.				.	.	140	.	.	.	.	.	.					.	.	.	150	.	.	.				.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure																			.	.	.	.	.													.	.	.										.	.	.	.								.	.	.
Query SS confidence																			.	.	.	.	.													.	.	.										.	.	.	.								.	.	.
Query Sequence		L	S	D	L	D	N	Q	S	I	C	N	N	E	L	N	H	E	.	.	.	.	.	L	S	N	E	K	V	N	K	F	S	R	F	.	.	.	F	E	W	A	F	P	K	R	K	.	.	.	.	A	N	I	A	L	R	G	.	.	.	Q	A	S	H	K	K	N	T	D	N	D	R	S	K	K	T	T	D	S	D
Query Conservation																			.	.	.	.	.													.	.	.										.	.	.	.								.	.	.
Alig confidence						.	.	.	.	.	.	.							.	.	.	.	.													.	.	.										.	.	.	.								.	.	.
Template Conservation						.	.	.	.	.	.	.
Template Sequence		W	N	N	I	.	.	.	.	.	.	.	K	K	W	Q	G	I	R	F	E	T	D	R	S	G	P	G	A	F	E	A	A	G	F	H	L	N	Q	H	I	Y	S	M	I	I	R	S	D	E	T	G	N	M	D	F	D	N	F	I	S	C	L	V	R	L	D	A	M	F	R	A	F	R	S	L	D	K	N	G	T
Template Known Secondary structure						.	.	.	.	.	.	.								T	T								S	G	G	G	T	T					T	T	T	T	S	S	T	T				S	S	S			S	S	T	T	T	T																T	T	T	T
Template Predicted Secondary structure						.	.	.	.	.	.	.
Template SS confidence
		793	.	.	.								.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.
		174	.	.	.	.			.	180	.	.	.	.	.	.
Predicted Secondary structure							.	.
Query SS confidence							.	.
Query Sequence		L	Y	V	T	Y	.	.	D	Q	W	R	D	F	L	L
Query Conservation							.	.
Alig confidence							.	.
Template Conservation
Template Sequence		G	Q	I	Q	V	N	I	Q	E	W	L	Q	L	T	M
Template Known Secondary structure		S										T
Template Predicted Secondary structure
Template SS confidence
		877	.	.	880	.	.	.	.	.	.	.	.	.	890	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions