Job Description D6W196 Confidence 99.80% Date Mon Jul 2 19:10:02 BST 2012 Rank 9 Aligned Residues 163 % Identity 13% Template c1kfxL_ PDB info PDB header:hydrolase Chain: L: PDB Molecule:m-calpain large subunit; PDBTitle: crystal structure of human m-calpain form i Resolution 3.15 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.				.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																																									.	.	.
Query SS confidence																																									.	.	.
Query Sequence		T	D	K	Q	R	D	I	R	Y	A	C	L	F	K	E	L	D	V	K	G	N	G	Q	V	T	L	D	N	L	I	S	A	F	E	K	N	D	H	P	.	.	.	L	K	G	N	D	E	A	I	K	M	L	F	T	A	M	D	V	N	K	D	S	V	V	D	L	S	D	F	K	K	Y	A	S	N	A	E	S	Q
Query Conservation																																									.	.	.
Alig confidence																			.																						.	.	.																																						.
Template Conservation																			.																																																														.
Template Sequence		S	E	D	D	I	D	D	G	V	R	R	L	F	A	Q	L	A	.	G	E	D	A	E	I	S	A	F	E	L	Q	T	I	L	R	R	V	L	A	K	R	K	S	D	G	F	S	I	E	T	C	K	I	M	V	D	M	L	D	S	D	G	S	G	K	L	G	L	K	E	F	Y	I	L	W	T	K	I	Q	K	.
Template Known Secondary structure			S				T	T					T	T	G	G	G	T	.		S	S														T	S								S												T	T			S	S	S	S																	.
Template Predicted Secondary structure																			.																																																														.
Template SS confidence
		526	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.		.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.					.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																											.	.	.	.
Query SS confidence																																											.	.	.	.
Query Sequence		I	W	N	G	F	Q	R	I	D	L	D	H	D	G	K	I	G	I	N	E	I	N	R	Y	L	S	D	L	D	N	Q	S	I	C	N	N	E	L	N	H	E	.	.	.	.	L	S	N	E	K	V	N	K	F	S	R	F	F	E	W	A	F	P	K	R	K	A	N	I	A	L	R	G	Q	A	S	H	K	K	N
Query Conservation																																											.	.	.	.
Alig confidence																														.													.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	Q	K	I	Y	R	E	I	D	V	D	R	S	G	T	M	N	S	Y	E	M	R	K	A	L	E	E	A	.	G	F	K	M	P	C	Q	L	H	Q	V	I	V	A	R	F	A	D	D	Q	L	I	I	D	F	D	N	F	V	R	C	L	V	R	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	T
Template Known Secondary structure												S	S		S				T	T									T	.	T														T	T			S	S	S															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																														.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		607	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.		.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.															670	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.			.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure																.	.
Query SS confidence																.	.
Query Sequence		T	D	N	D	R	S	K	K	T	T	D	S	D	L	.	.	Y	V	T	Y	D	Q	W	R	D	F	L	L	L
Query Conservation																.	.
Alig confidence																.	.
Template Conservation
Template Sequence		L	F	K	I	F	K	Q	L	D	P	E	N	T	G	T	I	E	L	D	L	I	S	W	L	C	F	S	V	L
Template Known Secondary structure											T	T			S
Template Predicted Secondary structure
Template SS confidence
		672	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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