Job Description D6W196 Confidence 99.76% Date Mon Jul 2 19:10:02 BST 2012 Rank 14 Aligned Residues 157 % Identity 16% Template c1juoB_ PDB info PDB header:metal transport Chain: B: PDB Molecule:sorcin; PDBTitle: crystal structure of calcium-free human sorcin: a member of2 the penta-ef-hand protein family Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.				50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																																					.	.	.
Query SS confidence																																					.	.	.
Query Sequence		R	Y	A	C	L	F	K	E	L	D	V	K	G	N	G	Q	V	T	L	D	N	L	I	S	A	F	E	K	N	D	H	P	L	K	G	.	.	.	N	D	E	A	I	K	M	L	F	T	A	M	D	V	N	K	D	S	V	V	D	L	S	D	F	K	K	Y	A	S	N	A	E	S	Q	I	W	N	G	F	Q	R
Query Conservation																																					.	.	.
Alig confidence										.																											.	.	.																																			.
Template Conservation										.																																																																.
Template Sequence		P	L	Y	G	Y	F	A	A	.	V	A	G	Q	D	G	Q	I	D	A	D	E	L	Q	R	C	L	T	Q	S	G	I	A	G	G	Y	K	P	F	N	L	E	T	C	R	L	M	V	S	M	L	D	R	D	M	S	G	T	M	G	F	N	E	F	K	E	L	W	A	V	L	N	G	.	W	R	Q	H	F	I	S
Template Known Secondary structure		T	T							.			T	T	T	T		B												T	T		S	S	S	S																	T	T			S		B															.
Template Predicted Secondary structure										.																																																																.
Template SS confidence
		34	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.				.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.
Query SS confidence																																				.	.	.
Query Sequence		I	D	L	D	H	D	G	K	I	G	I	N	E	I	N	R	Y	L	S	D	L	D	N	Q	S	I	C	N	N	E	L	N	H	E	.	.	.	L	S	N	E	K	V	N	K	F	S	R	F	F	E	W	A	F	P	K	R	K	A	N	I	A	L	R	G	Q	A	S	H	K	K	N	T	D	N	D	R	S	K	K
Query Conservation																																				.	.	.
Alig confidence																							.													.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	D	T	D	R	S	G	T	V	D	P	Q	E	L	Q	K	A	L	T	T	M	.	G	F	R	L	S	P	Q	A	V	N	S	I	A	K	R	Y	S	T	N	G	K	I	T	F	D	D	Y	I	A	C	C	V	K	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	A	L	T	D	S	F	R	R	R
Template Known Secondary structure				T	T			S														T	.	T															S		S	S	S	S														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																							.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.		.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.															.	.	.	170	.	.	.	.	.	.
		169	170	.	.	.	.	.	.			.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.
Query SS confidence										.	.
Query Sequence		T	T	D	S	D	L	Y	V	.	.	T	Y	D	Q	W	R	D	F	L	L	L	V
Query Conservation										.	.
Alig confidence										.	.
Template Conservation
Template Sequence		D	T	A	Q	Q	G	V	V	N	F	P	Y	D	D	F	I	Q	C	V	M	S	V
Template Known Secondary structure			T	T	S	S	S															T
Template Predicted Secondary structure
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions