Job Description D6W196 Confidence 99.54% Date Mon Jul 2 19:10:02 BST 2012 Rank 53 Aligned Residues 145 % Identity 17% Template c1eg4A_ PDB info PDB header:structural protein Chain: A: PDB Molecule:dystrophin; PDBTitle: structure of a dystrophin ww domain fragment in complex2 with a beta-dystroglycan peptide Resolution 2.00 Å

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		16	.	.	.	20	.	.	.	.	.	.	.					.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.												.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure														.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	A	C	L	F	K	E	L	D	V	K	G	.	.	.	.	N	G	Q	V	T	L	D	N	L	I	S	A	F	E	K	N	.	.	.	.	.	.	.	.	.	.	.	D	H	P	L	K	G	N	D	E	A	I	K	M	L	F	T	A	M	D	V	N	K	D	S	V	V	D	L	S	D	F	K	K	Y	A	S	N
Query Conservation														.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	S	A	A	C	D	A	L	D	Q	H	N	L	K	Q	N	D	Q	P	M	D	I	L	Q	I	I	N	C	L	T	T	I	Y	D	R	L	E	Q	E	H	N	N	L	V	N	V	P	L	C	V	D	M	C	L	N	W	L	L	N	V	Y	D	T	G	R	T	G	R	I	R	V	L	S	F	K	T	G	I	I	S
Template Known Secondary structure												T	T				T	T	S																						S	S	S	S																				T	T			S
Template Predicted Secondary structure
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
							81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	A	E	S	Q	I	W	N	G	F	Q	R	I	D	L	D	H	D	G	K	I	G	I	N	E	I	N	R	Y	L	S	D	L	D	N	Q	S	I	C	N	N	E	L	N	H	E	L	S	N	E	K	V	N	K	F	S	R	F	F	E	W	A	F	P	K	R	K	A	N	I	A	L	R	G	Q	A
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.														.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	C	K	A	H	L	E	D	K	Y	R	Y	L	F	K	Q	V	A	.	S	S	T	G	F	C	D	Q	R	R	L	G	L	L	L	H	D	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	Q	I	P	R	Q	L	G	E	V	A	S	F	G	G	S
Template Known Secondary structure		T	S	S	S														S	.		T	T	S		B													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T		G	G	G	G	T		S
Template Predicted Secondary structure																				.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.		.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.																												.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure
Query SS confidence
Query Sequence		S	H	K	K	N	T	D	N	D	R	S	K	K	T	T	D	S	D	L	Y	V	T	Y	D	Q	W	R	D	F	L	L	L	V	P	R
Query Conservation
Alig confidence															.	.
Template Conservation															.	.
Template Sequence		N	I	E	P	S	V	R	S	C	F	Q	F	A	.	.	N	N	K	P	E	I	E	A	A	L	F	L	D	W	M	R	L	E	P	Q
Template Known Secondary structure														T	.	.	T	T		S		B											T			T
Template Predicted Secondary structure															.	.
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270			.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions