Return to main results Retrieve Phyre Job Id

Job DescriptionQ04439
Confidence91.17%DateMon Jul 2 19:30:40 BST 2012
Rank245Aligned Residues103
% Identity21%Templated2ncda_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Motor proteins
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   105....110.........120.........130......... 140.......
Predicted Secondary structure 










.....................................
Query SS confidence 


































. . . . . . . . . . . . . .







. . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  VFAIAESMYYNMKSYNENQCVIISGESGAGKTEAA. . . . . . . . . . . . . . KRIMQYIA. . . . . . . . . . . . . . . . . . . . . . .
Query Conservation 
   
  

         
 












  ..............
     
 .......................
Alig confidence 












.




















..............







.......................
Template Conservation 

  
 
 
  

. 
 
  
 


 





 

 
     




    

              
 

  


 
 
Template Sequence  IFEMVSPLIQSAL. DGYNICIFAYGQTGSGKTYTMDGVPESVGVIPRTVDLLFDSIRGYRNLGWEYEIKATFLEIYNEVL
Template Known Secondary structure  TTT.TT

STTSSTTT
TTS
SSS
Template Predicted Secondary structure  .





























Template SS confidence 















































































   411........420... ......430.........440.........450.........460.........470.........480.........
 
   148.150.........160.........170.........180.........190...... ...200
Predicted Secondary structure  .......................



















....



Query SS confidence  . . . . . . . . . . . . . . . . . . . . . . .
















































. . . .



Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . AASSTHTESIGKIKDMVLATNPLLESFGCAKTLRNNNSSRHGKYLEIKF. . . . NNQF
Query Conservation  .......................                
   
 









  
 






   
 
....    
Alig confidence  .......................
















































....



Template Conservation   


        
 
 

        

 
  
 
  
    
  
   
    
  
  




 
  
 
        
Template Sequence  YDLLSNEQKDMEIRMAKNNKNDIYVSNITEETVLDPNHLRHLMHTAKMNRATASTAGNERSSRSHAVTKLELIGRHAEKQ
Template Known Secondary structure  TT
SS





TT
TT
TT



SS


SSS
TTTTTT

TTS
Template Predicted Secondary structure 









































Template SS confidence 















































































   490.........500.........510.........520.........530.........540.........550.........560.........
 
   201.......
Predicted Secondary structure 
Query SS confidence 







Query Sequence  EPCAGNIT
Query Conservation     
  
 
Alig confidence 







Template Conservation      
 
 
Template Sequence  EISVGSIN
Template Known Secondary structure 
Template Predicted Secondary structure 


Template SS confidence 







   570.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions