Return to main results Retrieve Phyre Job Id

Job DescriptionQ04439
Confidence100.00%DateMon Jul 2 19:30:40 BST 2012
Rank13Aligned Residues682
% Identity38%Templated1w7ja2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Motor proteins
Resolution2

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   30.........40.........50.........60 .........70.........80.........90.........100........
Predicted Secondary structure 















.


























Query SS confidence 






























.















































Query Sequence  SSKKKEVGVSDLTLLSKISDEAINENLKKRF. LNATIYTYIGHVLISVNPFRDLGIYTDAVMNEYKGKNRLEVPPHVFAI
Query Conservation         
  

  
    
   
  
  
 .    


  
  

 


      
       
         


   
Alig confidence 






























.















































Template Conservation   

  
  
 

  
  
 
  

  
  

     


  
 








 
  
       
        






Template Sequence  RNPDILVGENDLTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYEQLPIYGEDIINAYSGQNMGDMDPHIFAV
Template Known Secondary structure 


GGGTT
SSSTT
S

S


TT

SS

S

STT

GGGS


Template Predicted Secondary structure 






































Template SS confidence 















































































   63......70.........80.........90.........100.........110.........120.........130.........140..
 
   109110.........120.........130.........140.........150.........160.........170.........180........
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  AESMYYNMKSYNENQCVIISGESGAGKTEAAKRIMQYIAAASSTHTESIGKIKDMVLATNPLLESFGCAKTLRNNNSSRH
Query Conservation 
  

         
 












  
     
                 
   
 









  
 




Alig confidence 















































..





























Template Conservation 
  

  
      
 












  
 

 

          .. 
   
   
 









  
 




Template Sequence  AEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYFATVSGSASEA. . NVEEKVLASNPIMESIGNAKTTRNDNSSRF
Template Known Secondary structure  T


STTSST

SSSS..


SS
TT
S
Template Predicted Secondary structure 

















..












Template SS confidence 















































































   143......150.........160.........170.........180.........190 .........200.........210.........220
 
   189190.........200.........210.........220.........230.........240.........250.........260........
Predicted Secondary structure 










































Query SS confidence 















































































Query Sequence  GKYLEIKFNNQFEPCAGNITNYLLEKQRVVSQIKNERNFHIFYQFTKGASDAYRQTFGVQKPEQYVYTAAAGCISAETID
Query Conservation 

   
 
       
  
  







      







 
  
          
       

            
Alig confidence 















































































Template Conservation 

   
 
   
 
 

 
  







     








 

 
        
 
       

            
Template Sequence  GKYIEIGFDKRYRIIGANMRTYLLEKSRVVFQAEEERNYHIFYQLCASAALPEFKTLRLGNANYFHYTKQGGSPVIDGID
Template Known Secondary structure 
TTS



GGGGT


TT

SBTTTSGGGGGG



TTTSTTS



TT

Template Predicted Secondary structure 












































Template SS confidence 















































































   221........230.........240.........250.........260.........270.........280.........290.........300
 
   269270.........280.........290.........300.........310....... ..320.........330.........340.......
Predicted Secondary structure 











.








Query SS confidence 
















































.





























Query Sequence  DLQDYQETLKAMRVIGLGQEEQDQIFRMLAAILWIGNVSFIENEEGNAQ. VRDTSVTDFVAYLLQIDSQLLIKSLVERIM
Query Conservation 
         
   

        
   




 



 
         .          
 

      
   
     
Alig confidence 
















































.





























Template Conservation 
   
  
  

  

    
   
  










 
                
   
 



    
   
     
Template Sequence  DAKEMVNTRQACTLLGISDSYQMGIFRILAGILHLGNVEFASRDSDSCAIPPKHDPLTIFCDLMGVDYEEMAHWLCHRKL
Template Known Secondary structure  TT

T


TT

TT
T

S
Template Predicted Secondary structure 























Template SS confidence 















































































   301........310.........320.........330.........340.........350.........360.........370.........380
 
   348.350.........360.........370.........380.........390.........400.........410.........420.......
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  ETNHGMKRGSVYHVPLNIVQADAVRDALAKAIYNNLFDWIVSRVNKSLQAFPGAEKSIGILDIYGFEIFEHNSFEQICIN
Query Conservation                      
   

 


 

  

  

  

  
         
 



 


    
  





Alig confidence 


.....







































































Template Conservation     .....            
   

 


 

  

 


  

  
         
 



 


    








Template Sequence  ATA. . . . . TETYIKPISKLHAINARDALAKHIYANLFNWIVDHVNKALHSTVKQHSFIGVLDIYGFETFEINSFEQFCIN
Template Known Secondary structure 
S.....S




SS

S






SS

Template Predicted Secondary structure 
.....
























Template SS confidence 















































































   381.. ......390.........400.........410.........420.........430.........440.........450.....
 
   428.430.........440.........450.........460.........470.........480.........490.........500.......
Predicted Secondary structure 

























Query SS confidence 















































































Query Sequence  YVNEKLQQIFIQLTLKSEQETYEREKIQWTPIKYFDNKVVCDLIEARRPPGIFAAMNDSVATAHADSNAADQAFAQRLNL
Query Conservation    

 

          
   
  


    
   

     
       

   

             
         
Alig confidence 













































..













....













Template Conservation 
 




  
    
  
   
  


    
   

   
 

  ..  


 




   ....   

  

 

  
Template Sequence  YANEKLQQQFNMHVFKLEQEEYMKEQIPWTLIDFYDNQPCINLIEA. . KMGVLDLLDEECKM. . . . PKGSDDTWAQKLYN
Template Known Secondary structure  TT

GGG





S..TTSTS....TT

Template Predicted Secondary structure 














..




....



Template SS confidence 















































































   456...460.........470.........480.........490.........500. ........510..... ....520.........
 
   508.510.... .....520.........530.........540.........550........ .560.........570.........580.
Predicted Secondary structure  .





....















.













Query SS confidence  .






. . . .











































.






















Query Sequence  . FTTNPHF. . . . DLRSNKFVIKHYAGDVTYDIDGITDKNKDQLQKDLVELIGTTTN. TFLATIFPDTVDRESKRRPPTAG
Query Conservation  .       ....      
 
 
 

 
 
       

 
            
  .     
              
  
Alig confidence  .






....











































.






...........




Template Conservation                    
 
 



 
 
 
  




 
 
      

  
    

    ...........  

 
Template Sequence  THLNKCALFEKPRLSNKAFIIKHFADKVEYQCEGFLEKNKDTVYEEQIKVLKSSKKFKLLPELF. . . . . . . . . . . QKTVG
Template Known Secondary structure  TTT
TT

TT
SS
SS

TT



T
SS
STT...........


Template Predicted Secondary structure 


























...........
Template SS confidence 















































































   530.........540.........550.........560.........570.........580.........590... .....
 
   582.......590.........600.........610.........620.........630.........640.........650.........660.
Predicted Secondary structure 


























Query SS confidence 















































































Query Sequence  DKIIKSANDLVETLSKAQPSYIRTIKPNETKSPNDYDDRQVLHQIKYLGLQENVRIRRAGFAYRQVFEKFVERFYLLSPH
Query Conservation           
   
      







       
    
  

   
 

       
   
     
  

  
   
Alig confidence 















































































Template Conservation    

 

  
   
  
  








  
 
  

   
  


  



 


 
 


 
    

  

  
   
Template Sequence  HQFRNSLHLLMETLNATTPHYVRCIKPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQ
Template Known Secondary structure  TS


TT

TT


TTS

GGGS
G
Template Predicted Secondary structure 


























Template SS confidence 















































































   638.640.........650.........660.........670.........680.........690.........700.........710.......
 
   662.......670.........680.........690.........700.........710.........720.........730.........740.
Predicted Secondary structure 



















Query SS confidence 















































































Query Sequence  CSYAGDYTWQGDTLDAVKYILQDSSIPQQEYQLGVTSVFIKTPETLFALEHMRDRYWHNMAARIQRAWRRFLQRRIDAAT
Query Conservation                      
            
 



 
       

  
       
  

   
    
      
Alig confidence 




......






























.




































Template Conservation       ......  
     

  
        

 





 .     

  
          

   
  
 

   
 
Template Sequence  KDVLS. . . . . . DRKQTCKNVLEKLILDKDKYQFGKTKIFFRA. GQVAYLEKIRADKLRAACIRIQKTIRGWLMRKKYMRM
Template Known Secondary structure  GG

S......



GGG
SS
T.T
Template Predicted Secondary structure 




......









.
Template SS confidence 















































































   718.720.. .......730.........740.........750... ......760.........770.........780.........790
 
   742
Predicted Secondary structure 
Query SS confidence 
Query Sequence  K
Query Conservation   
Alig confidence 
Template Conservation 
Template Sequence  R
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   791
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions