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Job DescriptionQ04439
Confidence100.00%DateMon Jul 2 19:30:40 BST 2012
Rank23Aligned Residues574
% Identity38%Templated1mnda2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Motor proteins
Resolution2.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   24.....30.........40.........50.........60.........70.........80.........90.........100...
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Query Sequence  KKATFDSSKKKEVGVSDLTLLSKISDEAINENLKKRFLNATIYTYIGHVLISVNPFRDLGIYTDAVMNEYKGKNRLEVPP
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Template Sequence  TVSDKRRNPIKFDGVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAP
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TTSTT
SBGGG
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S

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TTTS

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   28.30.........40.........50.........60.........70.........80.........90.........100.......
 
   104.....110.........120.........130.........140.........150.........160.........170.........180...
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Query Sequence  HVFAIAESMYYNMKSYNENQCVIISGESGAGKTEAAKRIMQYIAAASSTHTESIGKIKDMVLATNPLLESFGCAKTLRNN
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Template Sequence  HIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGV. . . . . . . LEQQILQANPILEAFGNAKTTRNN
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STTSST

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   154.....160.........170.........180.........190.........200.. .......210.........220......
 
   184.....190.........200.........210.........220.........230.........240.........250.........260...
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Query Sequence  NSSRHGKYLEIKFNNQFEPCAGNITNYLLEKQRVVSQIKNERNFHIFYQFTKGASDAYRQTFGVQKPEQYVYTAAAGCIS
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Template Sequence  NSSRFGKFIEIQFNNAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVD
Template Known Secondary structure  S
SSS





TT

S


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   235....240.........250.........260.........270.........280.........290.........300.........310....
 
   264.....270.........280.........290.........300.........310.........320.........330.........340...
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Query Sequence  AETIDDLQDYQETLKAMRVIGLGQEEQDQIFRMLAAILWIGNVSFIENEEGNAQVRDTSVTDFVAYLLQIDSQLLIKSLV
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Template Sequence  IKGVSDEDEFKITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGAGEGAVLKDKTALNAASTVFGVNPSVLEKALM
Template Known Secondary structure 
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TTSSS
S

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   315....320.........330.........340.........350.........360.........370.........380.........390....
 
   344.....350.........360.........370.........380.........390.........400.........410.........420...
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Query Sequence  ERIMETNHGMKRGSVYHVPLNIVQADAVRDALAKAIYNNLFDWIVSRVNKSLQAFPGAEKSIGILDIYGFEIFEHNSFEQ
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Template Sequence  EPRILAG. . . . . RDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCSRA. . AYFIGVLDISGFEIFKVNSFEQ
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SS.....S








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SS

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   395....400. ........410.........420.........430.........440..... ....450.........460.......
 
   424.....430.........440.........450.........460.........470.........480.........490.........500...
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Query Sequence  ICINYVNEKLQQIFIQLTLKSEQETYEREKIQWTPIKYFDNKVVCDLIEARRPPGIFAAMNDSVATAHADSNAADQAFAQ
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Template Sequence  LCINYTNEKLQQFFNHHM. . . . . . . . . . . . . . . . . . . . . DSQATIDLIDGRQPPGILALLDEQSVF. . . . PNATDNTLIT
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Query Sequence  RLNL. FTTNPHF. . . . DLRSNKFVIKHYAGDVTYDIDGITDKNKDQLQKDLVELIGTTTNTFLATIFPDTVDRESKRRPP
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Template Sequence  KLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDP. . . NIASRFI
Template Known Secondary structure  TTT
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TT



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   546...550.........560.........570.........580.........590.........600.........610..... ....620..
 
   579580.........590.........600.........610.........620.........630.........
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Query Sequence  TAGDKIIKSANDLVETLSKAQPSYIRTIKPNETKSPNDYDDRQVLHQIKYLGLQENVRIRR
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Template Sequence  TVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEIRITRK
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TTS



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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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