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Job DescriptionQ04439
Confidence100.00%DateMon Jul 2 19:30:40 BST 2012
Rank15Aligned Residues685
% Identity36%Templated1d0xa2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Motor proteins
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  AILKRGARKKVHQEPAKRSANIKKATFDSSKKKEVGVSDLTLLSKISDEAINENLKKRFLNATIYTYIGHVLISVNPFRD
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Template Sequence  DRTSDYHKYLKVKQGDSDLFKLTVSDKRRNPIKFDGVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKR
Template Known Secondary structure 
TTSS



S


GGGG

S




GGGTT
SBGGG
SS

TT

TT

SS
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   6...10.........20.........30.........40.........50.........60.........70.........80.....
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  LGIYTDAVMNEYKGKNRLEVPPHVFAIAESMYYNMKSYNENQCVIISGESGAGKTEAAKRIMQYIAAASSTHTESIGKIK
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Template Sequence  IPIYTQEMVDIFKGRRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNG. . . . VLE
Template Known Secondary structure 
S

STT

GGGS


T


STTSSS


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   132.......140.........150.........160.........170.........180.........190.........200.... ...
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  DMVLATNPLLESFGCAKTLRNNNSSRHGKYLEIKFNNQFEPCAGNITNYLLEKQRVVSQIKNERNFHIFYQFTKGASDAY
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Template Sequence  QQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLLAGATAEE
Template Known Secondary structure 

SS
TTSS
TTS



GGGGT


TT

SBS
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   213......220.........230.........240.........250.........260.........270.........280.........290..
 
   242.......250.........260.........270.........280.........290.........300.........310.........320.
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Query Sequence  RQTFGVQKPEQYVYTAAAGCISAETIDDLQDYQETLKAMRVIGLGQEEQDQIFRMLAAILWIGNVSFIENEEGNAQVRDT
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Template Sequence  KKALHLAGPESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGAGEGAVLKDK
Template Known Secondary structure  T


GGG
TTTSSSS



TT

T

T


B

SSSS
B
S

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   293......300.........310.........320.........330.........340.........350.........360.........370..
 
   322.......330.........340.........350.........360.........370.........380.........390.........400.
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Query Sequence  SVTDFVAYLLQIDSQLLIKSLVERIMETNHGMKRGSVYHVPLNIVQADAVRDALAKAIYNNLFDWIVSRVNKSLQAFPGA
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Template Sequence  TALNAASTVFGVNPSVLEKALMEPRILAG. . . . . RDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCQE. RK
Template Known Secondary structure  T

S
T.....T





S.

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   373......380.........390.........400. ........410.........420.........430.........440.... ..
 
   402.......410.........420.........430.........440.........450.........460.........470.........480.
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Query Sequence  EKSIGILDIYGFEIFEHNSFEQICINYVNEKLQQIFIQLTLKSEQETYEREKIQWTPIKYFDNKVVCDLIEARRPPGIFA
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Template Sequence  AYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKIN. . . . . . . DSQATIDLIDGRQPPGILA
Template Known Secondary structure  S






SSB
T

.......

TTTT
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   447..450.........460.........470.........480.........490.........500 .........510.........
 
   482.......490.........500....... ..510.... .....520.........530.........540.........550......
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Query Sequence  AMNDSVATAHADSNAADQAFAQRLNL. FTTNPHF. . . . DLRSNKFVIKHYAGDVTYDIDGITDKNKDQLQKDLVELIGTT
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Template Sequence  LLDEQSVF. . . . PNATDNTLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDS
Template Known Secondary structure  T
....TT

TTTSTT

SS
SSTT
TT



T
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   528.530..... ....540.........550.........560.........570.........580.........590.........600...
 
   557..560.........570.........580.........590.........600.........610.........620.........630......
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Query Sequence  TNTFLATIFPDTVDRESKRRPPTAGDKIIKSANDLVETLSKAQPSYIRTIKPNETKSPNDYDDRQVLHQIKYLGLQENVR
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Template Sequence  SDNVVTKLFNDP. . NIASRAFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIR
Template Known Secondary structure  S
TT
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TS
SSTT

TT


TS
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   604.....610..... ....620.........630.........640.........650.........660.........670.........680.
 
   637..640.........650.........660.........670.........680.........690.........700.........710.....
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Query Sequence  IRRAGFAYRQVFEKFVERFYLLSPHCSYAGDYTWQGDTLDAVKYILQDSSIPQQEYQLGVTSVFIKTPETLFALEHMRD
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Template Sequence  ITRKGFPNRIIYADFVKRYYLLAPNVPRDAE. . . . . DSQKATDAVLKHLNIDPEQYRFGITKIFFRA. GQLARIEEARE
Template Known Secondary structure  TS

GGGSTT

TT
S.....
TT

GGG
SS
T.TTS

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   687..690.........700.........710....... ..720.........730.........740........ .750.........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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