Job Description Q04439 Confidence 100.00% Date Mon Jul 2 19:30:40 BST 2012 Rank 7 Aligned Residues 841 % Identity 30% Template c2ycuA_ PDB info PDB header:motor protein Chain: A: PDB Molecule:non muscle myosin 2c, alpha-actinin; PDBTitle: crystal structure of human non muscle myosin 2c in pre-power stroke2 state Resolution 2.25 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.		.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																.													.
Query SS confidence																.													.
Query Sequence		I	L	K	R	G	A	R	K	K	V	H	Q	E	P	.	A	K	R	S	A	N	I	K	K	A	T	F	.	D	S	S	K	K	K	E	V	G	V	S	D	L	T	L	L	S	K	I	S	D	E	A	I	N	E	N	L	K	K	R	F	L	N	A	T	I	Y	T	Y	I	G	H	V	L	I	S	V	N	P	F	R
Query Conservation																.													.
Alig confidence																.													.
Template Conservation
Template Sequence		L	R	D	E	G	E	E	E	A	E	V	E	L	A	E	S	G	R	R	L	R	L	P	R	D	Q	I	Q	R	M	N	P	P	K	F	S	K	A	E	D	M	A	E	L	T	C	L	N	E	A	S	V	L	H	N	L	R	E	R	Y	Y	S	G	L	I	Y	T	Y	S	G	L	F	C	V	V	I	N	P	Y	K
Template Known Secondary structure							S	S							T	T	T								G	G	G							G	G	G	T	T		S	B	G	G	G		S	S		S														T	T							T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		D	L	G	I	Y	T	D	A	V	M	N	E	Y	K	G	K	N	R	L	E	V	P	P	H	V	F	A	I	A	E	S	M	Y	Y	N	M	K	S	Y	N	E	N	Q	C	V	I	I	S	G	E	S	G	A	G	K	T	E	A	A	K	R	I	M	Q	Y	I	A	A	A	S	S	T	H	T	E	S	I	G	K	.
Query Conservation																																																																																	.
Alig confidence																																																																																	.
Template Conservation
Template Sequence		Q	L	P	I	Y	T	E	A	I	V	E	M	Y	R	G	K	K	R	H	E	V	P	P	H	V	Y	A	V	T	E	G	A	Y	R	S	M	L	Q	D	R	E	D	Q	S	I	L	C	T	G	E	S	G	A	G	K	T	E	N	T	K	K	V	I	Q	Y	L	A	H	V	A	S	S	P	K	G	R	K	E	P	G
Template Known Secondary structure				S			S								T	T			G	G	G	S																													B	T	T	S	S																S			S	S	S		S	S	S
Template Predicted Secondary structure
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
					160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	I	K	D	M	V	L	A	T	N	P	L	L	E	S	F	G	C	A	K	T	L	R	N	N	N	S	S	R	H	G	K	Y	L	E	I	K	F	N	N	Q	F	E	P	C	A	G	N	I	T	N	Y	L	L	E	K	Q	R	V	V	S	Q	I	K	N	E	R	N	F	H	I	F	Y	Q	F	T	K	G
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		V	P	G	L	E	R	Q	L	L	Q	A	N	P	I	L	E	A	F	G	N	A	K	T	V	K	N	D	N	S	S	R	F	G	K	F	I	R	I	N	F	D	V	A	G	Y	I	V	G	A	N	I	E	T	Y	L	L	E	K	S	R	A	I	R	Q	A	K	D	E	C	S	F	H	I	F	Y	Q	L	L	G	G
Template Known Secondary structure							S	T	T	T	S														S	S		T	T			S	S										T	T	S														G	G	G	G	T				T	T				B
Template Predicted Secondary structure
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310		.	.	.	.	.
Predicted Secondary structure																																																																												.
Query SS confidence																																																																												.
Query Sequence		A	S	D	A	Y	R	Q	T	F	G	V	Q	K	P	E	Q	Y	V	Y	T	A	A	A	G	C	I	S	A	E	T	I	D	D	L	Q	D	Y	Q	E	T	L	K	A	M	R	V	I	G	L	G	Q	E	E	Q	D	Q	I	F	R	M	L	A	A	I	L	W	I	G	N	V	S	F	I	E	.	N	E	E	G	N
Query Conservation																																																																												.
Alig confidence																											.	.																																																.
Template Conservation																											.	.
Template Sequence		A	G	E	Q	L	K	A	D	L	L	L	E	P	C	S	H	Y	R	F	L	T	N	G	P	S	.	.	S	S	P	G	Q	E	R	E	L	F	Q	E	T	L	E	S	L	R	V	L	G	F	S	H	E	E	I	I	S	M	L	R	M	V	S	A	V	L	Q	F	G	N	I	A	L	K	R	E	R	N	T	D	Q
Template Known Secondary structure										T	T				G	G	G		T	T	S	T	T		S		.	.	S	S	T	T	T															T	T																			G	G	G							S	S	S
Template Predicted Secondary structure																											.	.
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290			.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	V	R	D	T	S	V	T	D	F	V	A	Y	L	L	Q	I	D	S	Q	L	L	I	K	S	L	V	E	R	I	M	E	T	N	H	G	M	K	R	G	S	V	Y	H	V	P	L	N	I	V	Q	A	D	A	V	R	D	A	L	A	K	A	I	Y	N	N	L	F	D	W	I	V	S	R	V	N	K	S	L
Query Conservation
Alig confidence																																					.	.	.	.	.
Template Conservation																																					.	.	.	.	.
Template Sequence		A	T	M	P	D	N	T	A	A	Q	K	L	C	R	L	L	G	L	G	V	T	D	F	S	R	A	L	L	T	P	R	I	K	V	G	.	.	.	.	.	R	D	Y	V	Q	K	A	Q	T	K	E	Q	A	D	F	A	L	E	A	L	A	K	A	T	Y	E	R	L	F	R	W	L	V	L	R	L	N	R	A	L
Template Known Secondary structure					S												T	T												S					S	S	.	.	.	.	.	S	S
Template Predicted Secondary structure																																					.	.	.	.	.
Template SS confidence
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.						.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.
		396	.	.	.		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.		.	.	.	.	.	.	.	470	.	.	.
Predicted Secondary structure						.																																																																.
Query SS confidence						.																																																																.
Query Sequence		Q	A	F	P	.	G	A	E	K	S	I	G	I	L	D	I	Y	G	F	E	I	F	E	H	N	S	F	E	Q	I	C	I	N	Y	V	N	E	K	L	Q	Q	I	F	I	Q	L	T	L	K	S	E	Q	E	T	Y	E	R	E	K	I	Q	W	T	P	I	K	Y	F	.	D	N	K	V	V	C	D	L	I	E	A
Query Conservation						.																																																																.
Alig confidence						.																																																																.
Template Conservation
Template Sequence		D	R	S	P	R	Q	G	A	S	F	L	G	I	L	D	I	A	G	F	E	I	F	Q	L	N	S	F	E	Q	L	C	I	N	Y	T	N	E	K	L	Q	Q	L	F	N	H	T	M	F	V	L	E	Q	E	E	Y	Q	R	E	G	I	P	W	T	F	L	D	F	G	L	D	L	Q	P	C	I	D	L	I	E	R
Template Known Secondary structure					S				S											B				S	S	B																							T										T	T									S
Template Predicted Secondary structure
Template SS confidence
		419	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.
				474	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.		.	.	510	.	.	.	.	.	.	.	.						.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.
Predicted Secondary structure		.	.																																			.												.	.	.	.	.
Query SS confidence		.	.																																			.												.	.	.	.	.
Query Sequence		.	.	R	R	P	P	G	I	F	A	A	M	N	D	S	V	A	T	A	H	A	D	S	N	A	A	D	Q	A	F	A	Q	R	L	N	L	.	F	T	T	N	P	H	F	D	L	R	S	.	.	.	.	.	N	K	F	V	I	K	H	Y	A	G	D	V	T	Y	D	I	D	G	I	T	D	K	N	K	D	Q	L
Query Conservation		.	.																																			.												.	.	.	.	.
Alig confidence		.	.		.															.	.	.	.															.												.	.	.	.	.
Template Conservation					.															.	.	.	.
Template Sequence		P	A	N	.	P	P	G	L	L	A	L	L	D	E	E	C	W	F	.	.	.	.	P	K	A	T	D	K	S	F	V	E	K	V	A	Q	E	Q	G	G	H	P	K	F	Q	R	P	R	H	L	R	D	Q	A	D	F	S	V	L	H	Y	A	G	K	V	D	Y	K	A	N	E	W	L	M	K	N	M	D	P	L
Template Known Secondary structure			S	S	.	S										S	S	S	S	.	.	.	.	T	T															T	T	S	T	T						T	T	T			S	S						T	T								T	T
Template Predicted Secondary structure					.															.	.	.	.
Template SS confidence
		499	500	.		.	.	.	.	.	.	.	.	510	.	.	.	.	.					.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.
		546	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.					.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.
Predicted Secondary structure																								.	.	.	.
Query SS confidence																								.	.	.	.
Query Sequence		Q	K	D	L	V	E	L	I	G	T	T	T	N	T	F	L	A	T	I	F	P	D	.	.	.	.	T	V	D	R	E	S	K	R	R	P	P	T	A	G	D	K	I	I	K	S	A	N	D	L	V	E	T	L	S	K	A	Q	P	S	Y	I	R	T	I	K	P	N	E	T	K	S	P	N	D	Y	D	D	R	Q
Query Conservation																								.	.	.	.
Alig confidence																								.	.	.	.
Template Conservation
Template Sequence		N	D	N	V	A	A	L	L	H	Q	S	T	D	R	L	T	A	E	I	W	K	D	V	E	G	I	V	G	L	E	Q	R	R	G	M	F	R	T	V	G	Q	L	Y	K	E	S	L	S	R	L	M	A	T	L	S	N	T	N	P	S	F	V	R	C	I	V	P	N	H	E	K	R	A	G	K	L	E	P	R	L
Template Known Secondary structure											T		S	S							T	S	S			S	S		S							S	S																				T	S												S	S			T	T				T	T	T
Template Predicted Secondary structure
Template SS confidence
		574	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.
		622	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	H	Q	I	K	Y	L	G	L	Q	E	N	V	R	I	R	R	A	G	F	A	Y	R	Q	V	F	E	K	F	V	E	R	F	Y	L	L	S	P	H	C	S	Y	A	G	D	Y	T	W	Q	G	D	T	L	D	A	V	K	Y	I	L	Q	D	S	S	I	P	Q	Q	E	Y	Q	L	G	V	T	S	V	F	I
Query Conservation
Alig confidence																																											.	.	.	.
Template Conservation																																											.	.	.	.
Template Sequence		V	L	D	Q	L	R	C	N	G	V	L	E	G	I	R	I	C	R	Q	G	F	P	N	R	I	L	F	Q	E	F	R	Q	R	Y	E	I	L	T	P	N	A	.	.	.	.	I	P	K	G	F	M	D	G	K	Q	A	C	E	K	M	I	Q	A	L	E	L	D	P	N	L	Y	R	V	G	Q	S	K	I	F	F
Template Known Secondary structure										T											S															G	G	G	S	T	T	T	.	.	.	.	S		S					S			S				S				S	S				S	S					S	S		T	T
Template Predicted Secondary structure																																											.	.	.	.
Template SS confidence
		667	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.					.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.
		702	.	.	.	.	.	.	.	710	.	.	.	.			.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.						.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.
Predicted Secondary structure															.	.																							.	.	.	.	.																															.	.	.	.	.	.	.	.
Query SS confidence															.	.																							.	.	.	.	.																															.	.	.	.	.	.	.	.
Query Sequence		K	T	P	E	T	L	F	A	L	E	H	M	R	.	.	D	R	Y	W	H	N	M	A	A	R	I	Q	R	A	W	R	R	F	L	Q	R	R	.	.	.	.	.	I	D	A	A	T	K	I	Q	R	T	I	R	E	R	K	E	G	N	K	Y	E	K	L	R	D	Y	G	T	K	V	.	.	.	.	.	.	.	.
Query Conservation															.	.																							.	.	.	.	.																															.	.	.	.	.	.	.	.
Alig confidence				.											.	.																							.	.	.	.	.																															.	.	.	.	.	.	.	.
Template Conservation				.
Template Sequence		R	A	.	G	V	L	A	Q	L	E	E	E	R	A	S	E	Q	T	K	S	D	Y	L	K	R	A	N	E	L	V	Q	W	I	N	D	K	Q	A	S	L	E	S	R	D	F	G	D	S	I	E	S	V	Q	S	F	M	N	A	H	K	E	Y	K	K	T	E	K	P	P	K	G	Q	E	V	S	E	L	E	A	I
Template Known Secondary structure				.																														T	T	T	T	T				S																			T	T					T													S	S
Template Predicted Secondary structure				.
Template SS confidence
		743	.		.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.
						767	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	L	G	G	R	K	E	R	R	S	M	S	L	L	G	Y	R	A	F	M	G	D	Y	L	S	C	N	E	S	K	S	K	G	A	Y	I	K	R	Q	V	S	I	K	E	K	V	I	F	S	I	H	G	E	A	L	H	T	K	F	G	R	S	A	Q	R	L	K	K	T	F	L	L	T	P	T	T	L
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.
Template Conservation
Template Sequence		Y	N	S	L	Q	T	K	L	R	L	I	K	R	E	P	F	V	A	P	A	G	L	T	P	N	E	I	D	S	T	W	S	A	L	E	K	A	E	Q	E	H	A	E	A	L	R	I	E	L	K	R	Q	K	K	I	A	V	L	L	Q	K	Y	N	R	I	L	K	K	L	E	N	W	A	T	T	K	S	V	Y	L
Template Known Secondary structure		S						S	S		S	S	T																																														T	T	T	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		822	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.
		843	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	I	V	G	Q	T	L	V	Q	N	A	M	T	Y	T	Q	D	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	S	N	E	T	G	D	S	I	T	A	V	Q	A	K	L	K	N
Template Known Secondary structure					T
Template Predicted Secondary structure
Template SS confidence
		902	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.