Job Description Q04439 Confidence 86.63% Date Mon Jul 2 19:30:40 BST 2012 Rank 378 Aligned Residues 59 % Identity 15% Template c1s2mA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:putative atp-dependent rna helicase dhh1; PDBTitle: crystal structure of the dead box protein dhh1p Resolution 2.10 Å

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		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	P	F	R	D	L	G	I	Y	T	D	A	V	M	N	E	Y	K	G	K	N	R	L	E	V	P	P	H	V	F	A	I	A	E	S	M	Y	Y	N	M	K	S	Y	N	E	N	Q	C	V	I	I	S	G	E	S	G	A	G	K	T	E	A	A	K	R	I	M
Query Conservation
Alig confidence										.																														.	.	.	.	.	.	.
Template Conservation										.																														.	.	.	.	.	.	.
Template Sequence		N	T	F	E	D	F	Y	L	.	K	R	E	L	L	M	G	I	F	E	A	G	F	E	K	P	S	P	I	Q	E	E	A	I	P	V	A	I	T	.	.	.	.	.	.	.	G	R	D	I	L	A	R	A	K	N	G	T	G	K	T	A	A	F	V	I	P	T
Template Known Secondary structure				G	G	G	G			.											T	T			S															.	.	.	.	.	.	.	T									T	T	S
Template Predicted Secondary structure										.																														.	.	.	.	.	.	.
Template SS confidence
		46	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.								.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions