Job Description Q04439 Confidence 95.97% Date Mon Jul 2 19:30:40 BST 2012 Rank 34 Aligned Residues 194 % Identity 14% Template c1mv3A_ PDB info PDB header:endocytosis/exocytosis Chain: A: PDB Molecule:myc box dependent interacting protein 1; PDBTitle: nmr structure of the tumor suppressor bin1: alternative2 splicing in melanoma and interaction with c-myc Resolution UNK

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		949	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	S	S	T	I	S	V	R	R	G	N	P	P	N	S	Q	V	H	K	K	P	R	K	K	S	S	I	S	S	G	Y	H	A	S	S	S	Q	A	T	R	R	P	V	S	I	A	A	A	Q	H	V	P	T	A	P	A	S	R	H	S	K	K	P	A	P	P	P	P	G	M	Q	N	K	A	A	T	R	R	S	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	A	A	T	P	E	I	R	V	N	H	E	P	E	P	A	G	G	A	T	P	G	A	T	L	P	K	S	P	S	Q	L	R	K	G	P	P	V	P	P	P	P	K	H	T	P	S	K	E	V	K	Q	E	Q	I	L	S	L	F	E	D	T	F	V	P	E	I	S	V	T	T	P	S	Q	P	A	E	A	S	E
Template Known Secondary structure																																	S										S
Template Predicted Secondary structure
Template SS confidence
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
		1029	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	N	P	A	S	T	L	T	A	S	Q	S	N	A	R	P	S	P	P	T	A	A	T	R	A	T	P	A	A	T	P	A	A	A	A	M	G	S	G	R	Q	A	N	I	P	P	P	P	P	P	P	P	P	S	S	K	P	K	E	P	M	F	E	A	A	Y	D	F	P	G	S	G	S	P	S	E	L	P	L	K
Query Conservation
Alig confidence																																																																									.
Template Conservation																																																																									.
Template Sequence		V	A	G	G	T	Q	P	A	A	G	A	Q	E	P	G	E	T	A	A	S	E	A	A	S	S	S	L	P	A	V	V	V	E	T	F	P	A	T	V	N	G	T	V	E	G	G	S	G	A	G	R	L	D	L	P	P	G	F	M	F	K	V	Q	A	Q	H	D	Y	T	A	T	.	D	T	D	E	L	Q	L	K
Template Known Secondary structure					S	S																																															S	S			T	T								S	S		B				.	S	T	T				B
Template Predicted Secondary structure																																																																									.
Template SS confidence
		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.		.	.	.	.	.	.	430	.
		1109	1110	.	.	.	.	.	.						.	.	.	1120	.	.	.	.	.	.	.	.									.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.
Predicted Secondary structure										.	.	.	.	.													.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.													.	.	.	.	.	.	.	.
Query Sequence		K	G	D	V	I	Y	I	T	.	.	.	.	.	R	E	E	P	S	G	W	S	L	G	K	L	.	.	.	.	.	.	.	.	L	D	G	S	K	E	G	W	V	P	T	A	Y	M	K
Query Conservation										.	.	.	.	.													.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.													.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	G	D	V	V	L	V	I	P	F	Q	N	P	E	E	Q	D	E	G	W	L	M	G	V	K	E	S	D	W	N	Q	H	K	K	L	E	K	C	R	G	V	F	P	E	N	F	T	E
Template Known Secondary structure		S	S									S		G	G	G	S		T	T												T	G	G	G	G	G	G	T						S	T	T
Template Predicted Secondary structure
Template SS confidence
		432	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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