Phyre 2 alignment of Q04439 with c2ygrD_

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Job Description | Q04439
Confidence | 86.52% | Date | Mon Jul 2 19:30:40 BST 2012
Rank | 383 | Aligned Residues | 31
% Identity | 26% | Template | c2ygrD_
PDB info | PDB header:hydrolase | Chain: D: PDB Molecule:uvrabc system protein a; | PDBTitle: mycobacterium tuberculosis uvra
Resolution | 3.40 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 121 | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . |  |  |  |  |  |  | . | . | . | . | . | . | 150 | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |
Query Sequence |  | E | N | Q | C | V | I | I | S | G | E | S | G | A | G | K | T | E | A | A | K | R | I | M | . | . | . | . | . | . | Q | Y | I | A | A | A | S | S
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | R | D | A | L | I | V | F | T | G | L | S | G | S | G | K | S | S | L | A | F | D | T | I | F | A | E | G | Q | R | R | Y | V | E | S | L | S | A
Template Known Secondary structure |  | S | S | S |  |  |  |  |  |  | S | T | T | S | S |  |  |  |  |  | T | T | T |  |  |  |  |  |  |  |  |  |  | T | T | T |  | S
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 24 | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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