Job Description P40073 Confidence 84.43% Date Mon Jul 2 19:22:13 BST 2012 Rank 229 Aligned Residues 77 % Identity 12% Template c3a7kD_ PDB info PDB header:membrane protein Chain: D: PDB Molecule:halorhodopsin; PDBTitle: crystal structure of halorhodopsin from natronomonas2 pharaonis Resolution 2.00 Å

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		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	W	W	G	I	V	Y	Q	F	L	I	I	C	S	L	M	L	F	Y	C	F	D	L	V	D	H	Y	R	I	F	I	T	T	S	I	A	V	A	F	V	Y	N	T	N	S	A	T	N	L	V	Y	A	D	G	P	K	K	A	A	A	S	A	G	V	I	L	L	S	I	I	N	L	I	W	I	L	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	F	T	A	I	T	F	D	I	A	M	C	V	T	G	L	A	A	A	L	T	T	S	S	H	L	M	R	W	F	W	Y	A	I	S	C	A	C	F	I	V	V	L	Y	I	L	L	V	E	W	A	Q	D	A	K	A	A	G	T	A	D	I	F	S	T	L	K	L	L	T	V	V	M	W	L	G	Y
Template Known Secondary structure																								S																									T										T																	T
Template Predicted Secondary structure
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions