 |
| Job Description | P40073 | | Confidence | 99.50% | Date | Mon Jul 2 19:22:13 BST 2012 |
| Rank | 174 | Aligned Residues | 75 |
| % Identity | 25% | Template | c1ov3A_ |
| PDB info |
PDB header:oxidoreductase activator | Chain: A: PDB Molecule:neutrophil cytosol factor 1; |
PDBTitle: structure of the p22phox-p47phox complex
|
| Resolution | 1.80 Å |
|
 |
|   |   |
280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | |
. | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
| . |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
G | N | T | E | T | T | M | G | D | T | L | G | L | Y | S | D | I | G | D | D | N | F | I | Y | K | A | K | A | L | Y | P | Y | D | A | D | D | D | D | A | Y | E | I | S | F | E | Q | N | E | I | L | Q | V | S | D | I | . |
E | G | R | W | W | K | A | R | R | A | N | G | E | T | G | I | I | P | S | N | Y | V | Q |
| Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|   |
|   |   |
|
|
|   |
|
|
|
|   |
|
|
|
|
|   |
|   |
|   | . |
|
|
|
|
|   |
|
|   |   |
|
|   |   |
|
|
|
|
|
|
|
|
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   | . | . |
|
|
|   |   |   |
|
|   |
|   |
|   |   |   |   |   |   |
|
|   |   |   |   |   | . |   |
|   |   |
|   |
|
|   |   |
|
|
|
| Template Sequence |   |
P | A | S | F | L | E | P | L | D | S | P | D | E | T | E | D | P | E | P | N | Y | A | G | E | P | Y | V | A | I | K | A | Y | T | A | V | E | G | D | . |
. |
E | V | S | L | L | E | G | E | A | V | E | V | I | H | K | L | L | D | G | W | W | V | I | R | K | . |
D | D | V | T | G | Y | F | P | S | M | Y | L | Q |
| Template Known Secondary structure |   |
| G | G | G |
|
|
| S | S |
| T | T | S |
|
| S |
|
|
|
| T | T |
|  |  |  |  |  | S | S |
| B |
|
|
| S | T | T | . | . | B |
|
| B |
| T | T |
|  |  |  |  |  |  |
|
| T | T | S |  |  |  |  |  |  | . | T | T |  |  |  |  |  |  | G | G | G |  |  |
| Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  | . | . |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  | . |
|
|  |  |  |  |  |  |
|
|  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
206 | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | |
|
. | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | |
. | 270 | . | . | . | . | . | . | . | . | . | 280 | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|