Job Description P40073 Confidence 98.94% Date Mon Jul 2 19:22:13 BST 2012 Rank 213 Aligned Residues 54 % Identity 35% Template c1kjwA_ PDB info PDB header:neuropeptide Chain: A: PDB Molecule:postsynaptic density protein 95; PDBTitle: sh3-guanylate kinase module from psd-95 Resolution 1.80 Å

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		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.				.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.		.	.	.	.	.	340	.	.	.	.						.	.	.	.	.	350	.	.	.	.	.
Predicted Secondary structure																		.	.	.																		.											.	.	.	.	.
Query SS confidence																		.	.	.																		.											.	.	.	.	.
Query Sequence		I	Y	K	A	K	A	L	Y	P	Y	D	A	D	D	D	D	.	.	.	A	Y	E	I	S	F	E	Q	N	E	I	L	Q	V	S	D	I	.	E	G	R	W	W	K	A	R	R	A	.	.	.	.	.	N	G	E	T	G	I	I	P	S	N	Y
Query Conservation																		.	.	.																		.											.	.	.	.	.
Alig confidence																		.	.	.																		.											.	.	.	.	.
Template Conservation
Template Sequence		G	F	Y	I	R	A	L	F	D	Y	D	K	T	K	D	C	G	F	L	S	Q	A	L	S	F	R	F	G	D	V	L	H	V	I	D	A	G	D	E	E	W	W	Q	A	R	R	V	H	S	D	S	E	T	D	D	I	G	F	I	P	S	K	R
Template Known Secondary structure								S	S		B										S	S	B			B		T	T										S	S	S									S	S				S
Template Predicted Secondary structure
Template SS confidence
		430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions