Phyre 2 alignment of P40073 with c2zuuA_

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Job Description | P40073
Confidence | 45.73% | Date | Mon Jul 2 19:22:13 BST 2012
Rank | 239 | Aligned Residues | 53
% Identity | 21% | Template | c2zuuA_
PDB info | PDB header:transferase | Chain: A: PDB Molecule:lacto-n-biose phosphorylase; | PDBTitle: crystal structure of galacto-n-biose/lacto-n-biose i phosphorylase in2 complex with glcnac
Resolution | 2.30 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 295 | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . |  |  |  | . | . | . | 330 | . | . | . | . | . | . |  |  | . | . | . | 340 | . | . |  | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  | . |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  | . |  |  |  |  |  |
Query Sequence |  | D | I | G | D | D | N | F | I | Y | K | A | K | A | L | Y | P | Y | D | A | D | D | D | D | A | Y | E | I | S | F | E | Q | N | . | . | . | E | I | L | Q | V | S | D | I | E | G | . | . | R | W | W | K | A | R | . | R | A | N | G | E | T
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  | . |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  | . |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | T | L | H | M | D | E | T | P | Q | V | Y | L | L | T | D | R | I | L | A | E | S | D | . | T | V | D | I | P | L | M | E | S | F | F | A | E | Q | L | K | P | N | R | D | A | D | P | H | K | Y | W | E | V | V | D | R | T | T | G | E | V
Template Known Secondary structure |  | T | T | S | G | G | G | S |  |  |  |  |  |  |  |  |  |  |  |  | S | S | S | . |  |  |  |  |  | S | S | T | T | S |  | T | T | T |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  | T | T | T |  |  | B
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 65 | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . |  | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | .

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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