Phyre 2 alignment of P40073 with c2bkdN_

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Job Description | P40073
Confidence | 56.03% | Date | Mon Jul 2 19:22:13 BST 2012
Rank | 235 | Aligned Residues | 29
% Identity | 17% | Template | c2bkdN_
PDB info | PDB header:nuclear protein | Chain: N: PDB Molecule:fragile x mental retardation 1 protein; | PDBTitle: structure of the n-terminal domain of fragile x mental2 retardation protein
Resolution | UNK

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 315 | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . |  |  |  |  |  | . | . | . | 340 | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |
Query Sequence |  | D | D | D | A | Y | E | I | S | F | E | Q | N | E | I | L | Q | V | S | D | I | E | G | . | . | . | . | . | R | W | W | K | A | R | R
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | P | P | V | G | Y | N | K | D | I | N | E | S | D | E | V | E | V | Y | S | R | A | N | E | K | E | P | C | C | W | W | L | A | K | V
Template Known Secondary structure |  |  |  | S | S |  |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  | S | B | T | T | B |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 51 | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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