Phyre 2 alignment of P40073 with c1xovA_

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Job Description | P40073
Confidence | 44.04% | Date | Mon Jul 2 19:22:13 BST 2012
Rank | 240 | Aligned Residues | 40
% Identity | 18% | Template | c1xovA_
PDB info | PDB header:hydrolase | Chain: A: PDB Molecule:ply protein; | PDBTitle: the crystal structure of the listeria monocytogenes bacteriophage psa2 endolysin plypsa
Resolution | 1.80 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 324 | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | E | Q | N | E | I | L | Q | V | S | D | I | E | G | R | W | W | K | A | R | R | A | N | G | E | T | G | I | I | P | S | N | Y | V | Q | L | I | D | G | P | E | E
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | K | A | G | S | S | L | L | V | Y | E | H | N | K | Y | W | Y | K | A | Y | I | . | N | D | K | L | C | Y | I | Y | K | S | F | C | I | S | N | G | K | K | D | A
Template Known Secondary structure |  |  | T | T |  |  |  |  |  |  |  |  | S | S | S |  |  |  |  |  |  | . | T | T |  |  |  |  |  |  | G | G | G |  |  |  |  |  |  |  | S | T
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 209 | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . |  | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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