 |
Job Description | O13574 | Confidence | 1.35% | Date | Mon Jul 2 19:10:18 BST 2012 |
Rank | 86 | Aligned Residues | 28 |
% Identity | 25% | Template | c3c6dB_ |
PDB info |
PDB header:virus | Chain: B: PDB Molecule:polyprotein; |
PDBTitle: the pseudo-atomic structure of dengue immature virus
|
Resolution | 12.50 Å |
|
  |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | G | T | R | I | V | S | F | R | Q | P | N | Y | Y | P | V | T | Q | Q | K | G | A | S | Q | T | G | A | V |
Query Conservation |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |
|
|
|
|   |   |
|
|
|   |
|   |   |
|   |   |
|
|   |
|
|
|
|
|
Template Sequence |   |
Q | K | E | T | L | V | T | F | K | N | P | H | A | K | K | Q | D | V | V | V | L | G | S | Q | E | G | A | M |
Template Known Secondary structure |   |
T | G | G | G | T |  |  |  |
|
|
| B | T | T | B |
|
|  |  |  |
|
|
| T |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
233 | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|