06/07/2012 18:55:45 : INFO  : Run start: Fri Jul  6 18:55:45 BST 2012
06/07/2012 18:55:45 : INFO  : Initialised job
06/07/2012 18:55:45 : INFO  : Initialised job:
Sequence
>batch____
MGVGGTRIVSFRQPNYYPVTQQKGASQTGAVAQPYSSYCGLLMRWAVVEIRRRGKGKGRK
RKREREKGHTKFRIRRRSYLYFIRSCLVRPYSSGNKKNSCSFHKMLAIEIVLCLKAR

06/07/2012 18:55:45 : INFO  : Checked sequence
06/07/2012 18:55:45 : INFO  : Finding homologues with PSI-BLAST
06/07/2012 18:55:45 : INFO  : PSI-BLAST 3 iterations
06/07/2012 18:56:24 : INFO  : PSI-BLAST 5 iterations
06/07/2012 18:57:03 : INFO  : Finished PSI-BLAST
06/07/2012 18:57:03 : INFO  : Running Buildali to generate a3m file
06/07/2012 18:57:56 : INFO  : Converting to HMM
06/07/2012 18:57:56 : INFO  : Calibrating HMM
06/07/2012 18:57:59 : INFO  : Searching HMM database
06/07/2012 19:00:30 : INFO  : Finished buildali
06/07/2012 19:00:30 : INFO  : Predicting secondary structure
06/07/2012 19:00:31 : INFO  : Predicted secondary structure (PSI-Pred)
06/07/2012 19:00:31 : INFO  : Predicting Disordered regions
06/07/2012 19:00:31 : INFO  : Predicted Disorder (Disopred)
06/07/2012 19:00:31 : INFO  : Running memsat_svm check
06/07/2012 19:05:35 : INFO  : Globular protein
06/07/2012 19:05:35 : INFO  : Predicted Transmembrane (memsat_svm) ID '5c1f6053afedd3eb'
06/07/2012 19:05:35 : INFO  : Initialising fold library search
06/07/2012 19:05:35 : INFO  : Initialised search input
06/07/2012 19:05:35 : INFO  : Building Ensemble models
06/07/2012 19:05:35 : INFO  : Building hh.d1sknp_.model.1.pdb
06/07/2012 19:05:36 : INFO  : Building d1sknp_.1.pdb
06/07/2012 19:05:36 : INFO  : Building c3izcn_.2.pdb
06/07/2012 19:05:37 : INFO  : Building c2kd2A_.3.pdb
06/07/2012 19:05:37 : INFO  : Building c4a18P_.4.pdb
06/07/2012 19:05:38 : INFO  : Building c3iz5n_.5.pdb
06/07/2012 19:05:39 : INFO  : Building c2wfuA_.6.pdb
06/07/2012 19:05:39 : INFO  : Building c2wfvA_.7.pdb
06/07/2012 19:05:39 : INFO  : Building c2kz5A_.8.pdb
06/07/2012 19:05:39 : INFO  : Building c2v1lA_.9.pdb
06/07/2012 19:05:39 : INFO  : Building c1o7dD_.10.pdb
06/07/2012 19:05:40 : INFO  : Building d1qz8a_.11.pdb
06/07/2012 19:05:40 : INFO  : Building c2w56B_.12.pdb
06/07/2012 19:05:40 : INFO  : Building c2j98A_.13.pdb
06/07/2012 19:05:40 : INFO  : Building c1uw7A_.14.pdb
06/07/2012 19:05:40 : INFO  : Building d2j7ja3.15.pdb
06/07/2012 19:05:41 : INFO  : Building c2dzqA_.16.pdb
06/07/2012 19:05:41 : INFO  : Building c3kz0D_.17.pdb
06/07/2012 19:05:41 : INFO  : Building c3kz0C_.18.pdb
06/07/2012 19:05:41 : INFO  : Building c2dn5A_.19.pdb
06/07/2012 19:05:41 : INFO  : Building c4a18A_.20.pdb
06/07/2012 19:05:42 : INFO  : Finished HH model building
06/07/2012 19:05:42 : WARN  : Set python to /bmm/www/servers/phyre2/bin//newpython/python2.6
06/07/2012 19:05:46 : INFO  : html domain output complete ID '5c1f6053afedd3eb'
06/07/2012 19:07:54 : INFO  : Run end  : Fri Jul  6 19:07:54 BST 2012
