Phyre 2 alignment of O13574 with d1j1ta_

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Job Description | O13574
Confidence | 2.54% | Date | Mon Jul 2 19:10:18 BST 2012
Rank | 34 | Aligned Residues | 26
% Identity | 46% | Template | d1j1ta_
SCOP info | Concanavalin A-like lectins/glucanases | Concanavalin A-like lectins/glucanases | Alginate lyase
Resolution | 2.00

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | M | G | V | G | G | T | R | I | V | S | F | R | Q | P | N | Y | Y | P | V | T | Q | Q | K | G | A | S | Q | T | G | A | V | A | Q | P | Y | S | S
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | M | S | D | G | G | K | T | I | I | S | . | . | . | . | . | . | . | . | . | . | . | Q | H | H | A | S | D | T | G | T | I | S | K | V | Y | V | S
Template Known Secondary structure |  |  |  | T | T |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  | S | S | S |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 80 | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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