Phyre 2 alignment of O13574 with c1upsB_

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Job Description | O13574
Confidence | 3.48% | Date | Mon Jul 2 19:10:18 BST 2012
Rank | 30 | Aligned Residues | 34
% Identity | 32% | Template | c1upsB_
PDB info | PDB header:glycosyl hydrolase | Chain: B: PDB Molecule:glcnac-alpha-1,4-gal-releasing endo-beta- | PDBTitle: glcnac[alpha]1-4gal releasing endo-[beta]-galactosidase2 from clostridium perfringens
Resolution | 1.82 Å

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

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Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query Sequence |  | G | G | T | R | I | V | S | F | R | Q | P | N | Y | Y | P | V | . | T | Q | Q | K | G | A | S | Q | T | G | A | V | A | Q | P | Y | S | S
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Sequence |  | G | Y | T | R | F | V | N | R | W | K | P | N | M | S | I | H | T | E | S | Y | E | G | V | L | Q | Y | G | N | V | P | N | T | Y | W | T
Template Known Secondary structure |  | T |  |  |  |  |  |  | S | S | S | T | T |  |  |  |  |  | T | T |  |  | S | B |  |  |  |  |  |  |  | T | T |  | G | G
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 377 | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | .

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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