Phyre 2 alignment of O13574 with d1e8ob_

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Job Description | O13574
Confidence | 2.27% | Date | Mon Jul 2 19:10:18 BST 2012
Rank | 38 | Aligned Residues | 31
% Identity | 29% | Template | d1e8ob_
SCOP info | Signal recognition particle alu RNA binding heterodimer, SRP9/14 | Signal recognition particle alu RNA binding heterodimer, SRP9/14 | Signal recognition particle alu RNA binding heterodimer, SRP9/14
Resolution | 3.20

| Insertion relative to template
| Deletion relative to template
| Catalytic residue from the CSA
Detailed help on interpreting your alignment

|  | 63 | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | .
Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query Sequence |  | R | E | R | E | K | G | H | T | K | F | R | I | R | R | R | S | Y | L | Y | F | I | R | S | C | L | V | R | P | Y | S | S | G | N | K | K | N | S
Query Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Alig confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  | . |  |  |  |  |  |  |  |
Template Conservation |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  | . |  |  |  |  |  |  |  |
Template Sequence |  | K | C | R | T | S | G | S | V | Y | I | T | L | K | K | Y | D | N | K | . | . | . | . | . | C | L | L | R | A | . | T | D | G | K | K | K | I | S
Template Known Secondary structure |  |  |  | T | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  | . |  | S | S | S | S |  |  |
Template Predicted Secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |  |  |  |  |  | . |  |  |  |  |  |  |  |
Template SS confidence |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  | 19 | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . |  |  |  |  |  | . | . | . | 40 | . |  | . | . | . | . | . | . | . | .

Download: | Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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Lawrence Kelley, Benjamin Jefferys |
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