Job Description O13529 Confidence 49.54% Date Mon Jul 2 19:10:08 BST 2012 Rank 2 Aligned Residues 70 % Identity 33% Template c3k1qC_ PDB info PDB header:virus Chain: C: PDB Molecule:vp3b, the building block protein of inner shell; PDBTitle: backbone model of an aquareovirus virion by cryo-electron2 microscopy and bioinformatics Resolution 4.50 Å

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		76	.	.	.	80	.	.	.	.									.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.
Query Sequence		V	V	V	T	E	W	L	S	K	.	.	.	.	.	.	.	.	L	V	L	P	P	P	P	V	S	I	T	Q	V	F	S	L	S	R	K	R	G	E	F	S	S	G	Y	I	L	I	I	N	P	Y	K	S	F	L	R	S	L	L	D	F	S	I	F	N	N	T	A	K	N	K	S	S	T	F	T	L	N	L
Query Conservation											.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.																																													.
Template Conservation																																																															.
Template Sequence		V	C	M	T	N	W	A	S	L	G	D	E	G	R	G	L	E	V	R	L	P	P	P	T	D	S	S	V	H	A	Y	K	T	V	L	S	R	G	Y	I	D	N	A	Q	F	N	P	L	A	L	R	S	N	V	L	L	M	L	L	Q	F	.	T	L	S	N	L	K	I	N	K	S	S	T	F	T	S	D	V
Template Known Secondary structure				B	T	T	T	T				S	S			S				B				T	T	S		G	G	G	G	G		S	S	G	G	G	S				S	S		B		G	G	G													.
Template Predicted Secondary structure																																																															.
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.		.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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