Return to main results Retrieve Phyre Job Id

Job DescriptionO13529
Confidence2.43%DateMon Jul 2 19:10:08 BST 2012
Rank39Aligned Residues7
% Identity71%Templatec2jppB_
PDB info PDB header:translation/rnaChain: B: PDB Molecule:translational repressor; PDBTitle: structural basis of rsma/csra rna recognition: structure of2 rsme bound to the shine-dalgarno sequence of hcna mrna
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   100......
Predicted Secondary structure 


Query SS confidence 






Query Sequence  LSRKRGE
Query Conservation 






Alig confidence 






Template Conservation 



 

Template Sequence  LTRKVGE
Template Known Secondary structure 



TT
Template Predicted Secondary structure 



Template SS confidence 






   4.....10
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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