Job Description O13529 Confidence 25.42% Date Mon Jul 2 19:10:08 BST 2012 Rank 3 Aligned Residues 70 % Identity 23% Template c2cseW_ PDB info PDB header:virus Chain: W: PDB Molecule:major core protein lambda 1; PDBTitle: features of reovirus outer-capsid protein mu1 revealed by2 electron and image reconstruction of the virion at 7.0-a3 resolution Resolution 7.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		76	.	.	.	80	.	.	.	.									.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.
Query Sequence		V	V	V	T	E	W	L	S	K	.	.	.	.	.	.	.	.	L	V	L	P	P	P	P	V	S	I	T	Q	V	F	S	L	S	R	K	R	G	E	F	S	S	G	Y	I	L	I	I	N	P	Y	K	S	F	L	R	S	L	L	D	F	S	I	F	N	N	T	A	K	N	K	S	S	T	F	T	L	N	L
Query Conservation											.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.																																													.
Template Conservation																																																															.
Template Sequence		V	V	H	T	R	W	A	S	N	V	D	F	D	R	D	S	S	V	I	M	A	P	P	T	E	N	N	I	H	L	F	K	Q	L	L	N	T	E	T	L	S	V	R	G	A	N	P	L	M	F	R	A	N	V	L	H	M	L	L	E	F	.	V	L	D	N	L	Y	L	N	R	H	T	G	F	S	Q	D	H
Template Known Secondary structure					S	S	T	T			B	S	S											T	T	S		G	G	G	G	G		S	S	S		T	T		S		S	S				S	T	T	S												.				T					B
Template Predicted Secondary structure																																																															.
Template SS confidence
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.		.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions