|   |   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | |
|
. | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
I | K | I | R | N | A | L | L | K | A | T | D | P | K | L | R | S | D | N | W | Q | Y | I | L | D | V | C | D | L | V | K | E | D | P | E | D | N | G | Q | E | V | M | S | L | I | E | K | R | L | E | Q | . |
. |
Q | D | A | N | V | I | L | R | T | L | S | L | T | V | S | L | A | E | N | C | G | S | R | L | R | Q | E |
| Query Conservation |   |
  |   |
|   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|
|
|   |   | . | . |   |   |   |   |   |   |   |   |
|
|   |
|
|   |   |   |   |
|
|
|
|   |   |
|   |   |
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
|   |   |
|   |   |
|   |   |
|
|
|   |
|   |   |
|
|   |   |   |   |
|   |
|
|   |   |   |
|   |   |   | . |   | . |   |   |   |   |
|   |   |   |
|   |
|
|
|   |   |   |   |
|   |
|
|   |
|   |
|
|
|   |
|
|   |   |
|
|   |
|
|   |   |   |   |
|   |
|
| Template Sequence |   |
S | E | A | E | I | K | V | R | E | A | T | S | N | D | P | W | G | P | S | S | S | L | M | S | E | I | A | D | L | T | Y | N | V | . |
V | . |
A | F | S | E | I | M | S | M | I | W | K | R | L | N | D | H | G | K | N | W | R | H | V | Y | K | A | M | T | L | M | E | Y | L | I | K | T | G | S | E | R | V | S | Q | Q |
| Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  | T |
| S | S | S | S |
|
|
|  |  |  |  |  |  |  |  |  |  | T | T | S |  | . |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
|
| G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
|  |  |  |  |  |  |
| Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|  | . |  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
18 | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | |
. | |
. | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . |
|   |
|   |   |
84 | . | . | . | . | . | |
|
|
|
90 | . | . | . | . | . | . | . | . | . | |
100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . |
| Predicted Secondary structure |   |
 |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |
|
| . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
| Query SS confidence |   |
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
I | S | S | K | N | F | . |
. |
. |
. |
T | S | L | L | Y | A | L | I | E | S | . |
H | S | V | H | I | T | L | K | K | A | V | T | D | V | V | K | Q | L | S | D | S | F | K | D | D | P | S | L | R | A | M | G | D | L | Y | D | K | I | K | R |
| Query Conservation |   |
|   |   |   |   |
| . | . | . | . |
|   |   |
|   |   |   |   |   |   | . |   |   |   |   |   |   |
|   |   |
|   |
|   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
| Alig confidence |   |
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation |   |
  |   |   |   |   |   |   |
|   |   |
|   |   |
|   |
|   |
|   |   |
|   |
|   |
|   |   |
|
|   |
|
|   |   |
|   |   |
|
|   |
|   |   |   |
|   |   |
|
|   |   |
|   |   |   |
|   |   |   |   |   |
| Template Sequence |   |
C | K | E | N | M | Y | A | V | Q | T | L | K | D | F | Q | Y | V | D | R | D | G | K | D | Q | G | V | N | V | R | E | K | A | K | Q | L | V | A | L | L | R | D | E | D | R | L | R | E | E | R | A | H | A | L | K | T | K | E | K | L | A | Q |
| Template Known Secondary structure |   |
 |  |  | T |  |  |  |  |  | G | G | G | G |
|
|
| B |
| T | T | S |
| B |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
96 | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . |
|   |