Job Description P38753 Confidence 100.00% Date Mon Jul 2 19:20:20 BST 2012 Rank 2 Aligned Residues 185 % Identity 17% Template c3zyqA_ PDB info PDB header:signaling Chain: A: PDB Molecule:hepatocyte growth factor-regulated tyrosine kinase PDBTitle: crystal structure of the tandem vhs and fyve domains of hepatocyte2 growth factor-regulated tyrosine kinase substrate (hgs-hrs) at 1.483 a resolution Resolution 1.48 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	N	A	L	L	K	A	T	D	P	K	L	R	S	D	N	W	Q	Y	I	L	D	V	C	D	L	V	K	E	D	P	E	D	N	G	Q	E	V	M	S	L	I	E	K	R	L	E	Q	Q	D	A	N	V	I	L	R	T	L	S	L	T	V	S	L	A	E	N	C	G	S	R	L	R	Q	E	I	S	S	K
Query Conservation
Alig confidence																																	.
Template Conservation																																	.
Template Sequence		F	E	R	L	L	D	K	A	T	S	Q	L	L	L	E	T	D	W	E	S	I	L	Q	I	C	D	L	I	R	Q	G	.	D	T	Q	A	K	Y	A	V	N	S	I	K	K	K	V	N	D	K	N	P	H	V	A	L	Y	A	L	E	V	M	E	S	V	V	K	N	C	G	Q	T	V	H	D	E	V	A	N	K
Template Known Secondary structure										T		T	T		S	S															T	T	.	S	S														T		S	S																											S	S
Template Predicted Secondary structure																																	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	F	T	S	L	L	Y	A	L	I	E	S	H	S	V	H	I	T	L	K	K	A	V	T	D	V	V	K	Q	L	S	D	S	F	K	D	D	P	S	L	R	A	M	G	D	L	Y	D	K	I	K	R	K	A	P	Y	L	V	Q	P	N	V	P	E	K	H	N	M	S	T	Q	A	D	N	S	D	D	E	E	L
Query Conservation
Alig confidence												.																																																						.	.	.	.
Template Conservation												.																																																						.	.	.	.
Template Sequence		Q	T	M	E	E	L	K	D	L	L	.	K	R	Q	V	E	V	N	V	R	N	K	I	L	Y	L	I	Q	A	W	A	H	A	F	R	N	E	P	K	Y	K	V	V	Q	D	T	Y	Q	I	M	K	V	E	G	H	V	F	P	E	F	K	E	S	D	.	.	.	.	A	M	F	A	A	E	R	A	P	D	W	V
Template Known Secondary structure												.																							T	T	T		G	G	G														T								G	G	G	.	.	.	.	G
Template Predicted Secondary structure												.																																																						.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.					150	.	.	.	.	.	.	.	.	.	160	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	K	A	L	K	M	S	L	F	E	Y	E	K	Q	K	K	L	Q	E	Q	E	K	E	S	A	E	V	L	P	Q	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	A	E	E	C	H	R	C	R	V	Q	F	G	V	M	T	R	K	H	H	C	R	A	C	G	Q	I	F	C	G	K
Template Known Secondary structure				S	B		T	T	T			B		B	T	T	B						T	T	T						T	T
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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