Job Description P38753 Confidence 22.11% Date Mon Jul 2 19:20:20 BST 2012 Rank 339 Aligned Residues 95 % Identity 13% Template c3bu8B_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:telomeric repeat-binding factor 2; PDBTitle: crystal structure of trf2 trfh domain and tin2 peptide2 complex Resolution 2.15 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	Q	Y	I	L	D	V	C	D	L	V	K	E	D	P	E	D	N	G	Q	E	V	M	S	L	I	E	K	R	L	E	Q	Q	D	A	N	V	I	L	R	T	L	S	L	T	V	S	L	A	E	N	C	G	S	R	L	R	Q	E	I	S	S	K	N	F	T	S	L	L	Y	A	L	I	E	S	H	S	V	H	I
Query Conservation
Alig confidence																.																			.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.
Template Conservation																.																			.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.
Template Sequence		L	E	S	A	I	N	V	L	E	M	I	K	T	E	.	F	T	L	T	E	A	V	V	E	S	S	R	K	L	V	K	E	A	.	.	.	.	.	.	.	.	.	.	A	V	I	I	C	I	K	N	K	E	F	E	K	A	S	K	I	L	.	.	.	.	.	.	.	.	K	K	H	M	S	K	D	P	T	T	Q
Template Known Secondary structure																.	T	T																	.	.	.	.	.	.	.	.	.	.								T	T										.	.	.	.	.	.	.	.								T	T	T
Template Predicted Secondary structure																.																			.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.
Template SS confidence
		129	130	.	.	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160											.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.									.	180	.	.	.	.	.	.	.	.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure																															.
Query SS confidence																															.
Query Sequence		T	L	K	K	A	V	T	D	V	V	K	Q	L	S	D	S	F	K	D	D	P	S	L	R	A	M	G	D	L	.	Y	D	K	I	K	R	K	A	P	Y	L
Query Conservation																															.
Alig confidence														.	.	.	.	.	.												.
Template Conservation														.	.	.	.	.	.
Template Sequence		K	L	R	N	D	L	L	N	I	I	R	E	.	.	.	.	.	.	K	N	L	A	H	P	V	I	Q	N	F	S	Y	E	T	F	Q	Q	K	M	L	R	F
Template Known Secondary structure														.	.	.	.	.	.	T		T	T	S					T
Template Predicted Secondary structure														.	.	.	.	.	.
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.							.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions