Job Description P38753 Confidence 86.22% Date Mon Jul 2 19:20:20 BST 2012 Rank 264 Aligned Residues 89 % Identity 13% Template c2vsxF_ PDB info PDB header:translation/hydrolase Chain: F: PDB Molecule:eukaryotic initiation factor 4f subunit p150; PDBTitle: crystal structure of a translation initiation complex Resolution 2.8 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.				.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure																																																																	.	.	.
Query SS confidence																																																																	.	.	.
Query Sequence		Q	Y	I	L	D	V	C	D	L	V	K	E	D	P	E	D	N	G	Q	E	V	M	S	L	I	E	K	R	L	E	Q	Q	D	A	N	V	I	L	R	T	L	S	L	T	V	S	L	A	E	N	C	G	S	R	L	R	Q	E	I	S	S	K	N	.	.	.	F	T	S	L	L	Y	A	L	I	E	S	H	S	V
Query Conservation																																																																	.	.	.
Alig confidence															.																																																		.	.	.
Template Conservation															.
Template Sequence		G	L	V	R	F	I	G	F	L	Y	R	L	N	.	L	L	T	G	K	M	M	F	E	C	F	R	R	L	M	K	D	L	T	D	S	P	S	E	E	T	L	E	S	V	V	E	L	L	N	T	V	G	E	Q	F	E	T	D	S	G	S	Q	L	L	D	S	L	F	G	I	L	D	N	I	I	Q	T	A	K	I
Template Known Secondary structure													T	T	.		S															T	T	S	S																						T	S																				T	S
Template Predicted Secondary structure															.
Template SS confidence
		745	.	.	.	.	750	.	.	.	.	.	.	.		.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.
		103	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	I	T	L	K	K	A	V	T	D	V	V	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	S	R	I	K	F	K	L	I	D	I	K	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		833	.	.	.	.	.	.	840	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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