Job Description P38753 Confidence 72.40% Date Mon Jul 2 19:20:20 BST 2012 Rank 285 Aligned Residues 112 % Identity 11% Template c2qnaA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:importin subunit beta-1; PDBTitle: crystal structure of human importin-beta (127-876) in complex with the2 ibb-domain of snurportin1 (1-65) Resolution 2.84 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.		.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure																																		.
Query SS confidence																																		.
Query Sequence		W	Q	Y	I	L	D	V	C	D	L	V	K	E	D	P	E	D	N	G	Q	E	V	M	S	L	I	E	K	R	L	E	Q	.	Q	D	A	N	V	I	L	R	T	L	S	L	T	V	S	L	A	E	N	C	G	S	R	L	R	Q	E	I	S	S	K	N	F	T	S	L	L	Y	A	L	I	E	S	H	S	V	H
Query Conservation																																		.
Alig confidence																																		.																														.	.
Template Conservation																																																																.	.
Template Sequence		L	M	A	V	S	T	L	V	E	V	L	G	G	E	F	L	K	Y	M	E	A	F	K	P	F	L	G	I	G	L	K	N	Y	A	E	Y	Q	V	C	L	A	A	V	G	L	V	G	D	L	C	R	A	L	Q	S	N	I	I	P	F	C	D	.	.	E	V	M	Q	L	L	L	E	N	L	G	N	E	N	V	H
Template Known Secondary structure													G	G	G	G	G	G	G																S	S																			G	G	G	G						.	.													T	T	S
Template Predicted Secondary structure																																																																.	.
Template SS confidence
		629	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690			.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	L	K	K	A	V	T	D	V	V	K	Q	L	S	D	S	F	K	D	D	P	S	L	R	A	M	G	D	L	Y	D	K	I	K	R
Query Conservation
Alig confidence																				.
Template Conservation																				.
Template Sequence		R	S	V	K	P	Q	I	L	S	V	F	G	D	I	A	L	A	I	.	G	G	E	F	K	K	Y	L	E	V	V	L	N	T	L	Q	Q
Template Known Secondary structure		T	T																	.	G	G	G	G
Template Predicted Secondary structure																				.
Template SS confidence
		707	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.		.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions