Job Description P38753 Confidence 66.38% Date Mon Jul 2 19:20:20 BST 2012 Rank 290 Aligned Residues 97 % Identity 11% Template c2ot8B_ PDB info PDB header:transport protein Chain: B: PDB Molecule:transportin-1; PDBTitle: karyopherin beta2/transportin-hnrnpm nls complex Resolution 3.10 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	Q	Y	I	L	D	V	C	D	L	V	K	E	D	P	E	D	N	G	Q	E	V	M	S	L	I	E	K	R	L	E	Q	Q	D	A	N	V	I	L	R	T	L	S	L	T	V	S	L	A	E	N	C	G	S	R	L	R	Q	E	I	S	S	K	N	F	T	S	L	L	Y	A	L	I	E	S	H	S	V	H	I
Query Conservation
Alig confidence																																																															.	.
Template Conservation																																																															.	.
Template Sequence		F	A	L	L	G	D	L	T	K	A	C	F	Q	H	V	K	P	C	I	A	D	F	M	P	I	L	G	T	N	L	N	P	E	F	I	S	V	C	N	N	A	T	W	A	I	G	E	I	S	I	Q	M	G	I	E	M	Q	P	Y	I	P	.	.	M	V	L	H	Q	L	V	E	I	I	N	R	P	N	T	P	K
Template Known Secondary structure																	G	G	G											T			T	T	S																			G	G	G	G	G	G	G			.	.													T	T
Template Predicted Secondary structure																																																															.	.
Template SS confidence
		688	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.			.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	K	K	A	V	T	D	V	V	K	Q	L	S	D	S	F	K	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	L	L	E	N	T	A	I	T	I	G	R	L	G	Y	V	C	P	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		766	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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