Return to main results Retrieve Phyre Job Id

Job DescriptionP38753
Confidence98.78%DateMon Jul 2 19:20:20 BST 2012
Rank83Aligned Residues60
% Identity35%Templatec2epdA_
PDB info PDB header:protein bindingChain: A: PDB Molecule:rho gtpase-activating protein 4; PDBTitle: solution structure of sh3 domain in rho-gtpase-activating2 protein 4
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   221........230.........240.........250.........260.........270.........280
Predicted Secondary structure 










































Query SS confidence 



























































Query Sequence  RVRALYDLTTNEPDELSFRKGDVITVLEQVYRDWWKGALRGNMGIFPLNYVTPIVEPSKE
Query Conservation   
 

         

    

 
 

      
         
  
   
         
Alig confidence 



























































Template Conservation     

 

 
    


   



 
       
      
  
 

  

         
Template Sequence  EAVACFAYTGRTAQELSFRRGDVLRLHERASSDWWRGEHNGMRGLIPHKYITLPAGTEKQ
Template Known Secondary structure  SS

SSTTB

TT
TTTTSSS

SS
S

Template Predicted Secondary structure 

























Template SS confidence 



























































   750.........760.........770.........780.........790.........800.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions