Return to main results Retrieve Phyre Job Id

Job DescriptionP38753
Confidence98.86%DateMon Jul 2 19:20:20 BST 2012
Rank45Aligned Residues58
% Identity28%Templatec2dmoA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:neutrophil cytosol factor 2; PDBTitle: refined solution structure of the 1st sh3 domain from human2 neutrophil cytosol factor 2 (ncf-2)
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   222.......230.........240.........250.........260.........270.........
Predicted Secondary structure 









































Query SS confidence 

























































Query Sequence  VRALYDLTTNEPDELSFRKGDVITVLEQVYRDWWKGALRGNMGIFPLNYVTPIVEPSK
Query Conservation 
 

         

    

 
 

      
         
  
   
        
Alig confidence 

























































Template Conservation    

 

      


   

 
 
       
      
  
  
  

  
    
Template Sequence  HRVLFGFVPETKEELQVMPGNIVFVLKKGNDNWATVMFNGQKGLVPCNYLEPVSGPSS
Template Known Secondary structure 
SS



SSSS



TT


SSS
TT
STT


S

Template Predicted Secondary structure 

























Template SS confidence 

























































   10.........20.........30.........40.........50.........60.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions