Job Description P38753 Confidence 92.46% Date Mon Jul 2 19:20:20 BST 2012 Rank 247 Aligned Residues 71 % Identity 7% Template c2c1tA_ PDB info PDB header:protein transport/membrane protein Chain: A: PDB Molecule:importin alpha subunit; PDBTitle: structure of the kap60p:nup2 complex Resolution 2.6 Å

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		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	L	I	E	K	R	L	E	Q	Q	D	A	N	V	I	L	R	T	L	S	L	T	V	S	L	A	E	N	C	G	S	R	L	R	Q	E	I	S	S	K	N	F	T	S	L	L	Y	A	L	I	E	S	H	S	V	H	I	T	L	K	K	A	V	T	D	V	V	K	Q	L	S
Query Conservation
Alig confidence																																																					.
Template Conservation																																																					.
Template Sequence		L	P	Q	M	T	Q	Q	L	N	S	D	D	M	Q	E	Q	L	S	A	T	V	K	F	R	Q	I	L	S	R	E	H	R	P	P	I	D	V	V	I	Q	A	G	V	V	P	R	L	V	E	F	M	.	R	E	N	Q	P	E	M	L	Q	L	E	A	A	W	A	L	T	N	I	A
Template Known Secondary structure									T	T		S																T	T		S	S	S									T	T								T	T	.	S	T	T	S
Template Predicted Secondary structure																																																					.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions