Phyre 2 alignment of P38753 with c2bnxA

Job Description P38753
Confidence 38.12% Date Mon Jul 2 19:20:20 BST 2012

Rank 317 Aligned Residues 53

% Identity 15% Template c2bnxA_

PDB info PDB header:structural protein Chain: A: PDB Molecule:diaphanous protein homolog 1; PDBTitle: crystal structure of the dimeric regulatory domain of mouse2 diaphaneous-related formin (drf), mdia1

Resolution 2.4 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.																			.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	S	D	N	W	Q	Y	I	L	D	V	C	D	L	V	K	E	D	P	E	D	N	G	Q	E	V	M	S	L	I	E	K	R	L	E	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	D	A	N	V	I	L	R	T	L	S	L	T	V	S	L	A	E	N
Query Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.
Template Sequence	D	E	D	F	F	D	L	K	G	R	L	D	D	I	R	M	E	M	D	.	D	F	G	E	V	F	Q	I	I	L	N	T	V	K	D	S	K	A	E	P	H	F	L	S	I	L	Q	H	L	L	L	V	R	N	D	Y	E	A	R	P	Q	Y	Y	K	L	I	E	E	C	V	S	Q
Template Known Secondary structure																				.														T	T	S	T													T	T	S				T	T	T
Template Predicted Secondary structure																				.
Template SS confidence
	361	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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