Job Description P38753 Confidence 47.78% Date Mon Jul 2 19:20:20 BST 2012 Rank 302 Aligned Residues 63 % Identity 16% Template c1z9eA_ PDB info PDB header:protein binding/transcription Chain: A: PDB Molecule:pc4 and sfrs1 interacting protein 2; PDBTitle: solution structure of the hiv-1 integrase-binding domain in2 ledgf/p75 Resolution UNK

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		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	Q	Q	D	A	N	V	I	L	R	T	L	S	L	T	V	S	L	A	E	N	C	G	S	R	L	R	Q	E	I	S	S	K	N	F	T	S	L	L	Y	A	L	I	E	S	H	S	V	H	I	T	L	K	K	A	V	T	D	V	V	K	Q	L	S	D	S	F
Query Conservation
Alig confidence																					.	.												.	.															.
Template Conservation																					.	.												.	.															.
Template Sequence		I	D	N	L	D	V	N	R	C	I	E	A	L	D	E	L	A	S	L	.	.	Q	V	T	M	Q	Q	A	Q	K	H	T	.	.	E	M	I	T	T	L	K	K	I	R	R	F	K	V	.	S	Q	V	I	M	E	K	S	T	M	L	Y	N	K	F	K	N	M	F
Template Known Secondary structure		G	G	G																S	.	.								G	G	G		.	.										T	T		T	T	.		S	S
Template Predicted Secondary structure																					.	.												.	.															.
Template SS confidence
		365	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.			.	.	.	.	.	.	390	.	.	.	.			.	.	.	.	.	400	.	.	.	.	.	.	.	.		.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions