Job Description P38753 Confidence 83.18% Date Mon Jul 2 19:20:20 BST 2012 Rank 268 Aligned Residues 65 % Identity 9% Template c1w63A_ PDB info PDB header:endocytosis Chain: A: PDB Molecule:adapter-related protein complex 1 gamma 1 PDBTitle: ap1 clathrin adaptor core Resolution 4.0 Å

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		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	E	V	M	S	L	I	E	K	R	L	E	Q	Q	D	A	N	V	I	L	R	T	L	S	L	T	V	S	L	A	E	N	C	G	S	R	L	R	Q	E	I	S	S	K	N	F	T	S	L	L	Y	A	L	I	E	S	H	S	V	H	I	T	L	K	K	A	V	T	D	V	V	K	Q
Query Conservation
Alig confidence																																							.	.	.	.	.	.														.	.
Template Conservation																																							.	.	.	.	.	.														.	.
Template Sequence		V	L	A	I	N	I	L	G	R	F	L	L	N	N	D	K	N	I	R	Y	V	A	L	T	S	L	L	K	T	V	Q	T	D	H	N	A	V	.	.	.	.	.	.	Q	R	H	R	S	T	I	V	D	C	L	K	D	.	.	L	D	V	S	I	K	R	R	A	M	E	L	S	F	A
Template Known Secondary structure													T		S	S	T	T	T																				.	.	.	.	.	.	G	G	G							G	G	G	S	.	.	S
Template Predicted Secondary structure																																							.	.	.	.	.	.														.	.
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.							.	.	.	.	.	.	350	.	.	.	.	.	.			.	.	.	360	.	.	.	.	.	.	.	.	.	370	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions