Job Description P38753 Confidence 88.51% Date Mon Jul 2 19:20:20 BST 2012 Rank 259 Aligned Residues 89 % Identity 6% Template c1pjmB_ PDB info PDB header:protein transport Chain: B: PDB Molecule:importin alpha-2 subunit; PDBTitle: mouse importin alpha-bipartite nls from human2 retinoblastoma protein complex Resolution 2.50 Å

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		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	L	I	E	K	R	L	E	Q	Q	D	A	N	V	I	L	R	T	L	S	L	T	V	S	L	A	E	N	C	G	S	R	L	R	Q	E	I	S	S	K	N	F	T	S	L	L	Y	A	L	I	E	S	H	S	V	H	I	T	L	K	K	A	V	T	D	V	V	K	Q	L	S	D	S	F	K	D	D	P	S
Query Conservation
Alig confidence																																																					.	.
Template Conservation																																																					.	.
Template Sequence		V	P	F	L	V	G	V	L	S	K	A	D	F	K	T	Q	K	E	A	A	W	A	I	T	N	Y	T	S	G	G	T	V	E	Q	I	V	Y	L	V	H	C	G	I	I	E	P	L	M	N	L	L	.	.	S	A	K	D	T	K	I	I	Q	V	I	L	D	A	I	S	N	I	F	Q	A	A	E	K	L	G	E
Template Known Secondary structure											S	S																			S											T	T									T	.	.	T		S																					T	T	T	T
Template Predicted Secondary structure																																																					.	.
Template SS confidence
		379	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.			430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.
		127	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	A	M	G	D	L	Y	D	K	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	E	K	L	S	I	M	I	E	E	C
Template Known Secondary structure												T
Template Predicted Secondary structure
Template SS confidence
		457	.	.	460	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions