Job Description P38753 Confidence 100.00% Date Mon Jul 2 19:20:20 BST 2012 Rank 1 Aligned Residues 187 % Identity 16% Template c1dvpA_ PDB info PDB header:transferase Chain: A: PDB Molecule:hepatocyte growth factor-regulated tyrosine PDBTitle: crystal structure of the vhs and fyve tandem domains of hrs,2 a protein involved in membrane trafficking and signal3 transduction Resolution 2.00 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	S	S	A	I	K	I	R	N	A	L	L	K	A	T	D	P	K	L	R	S	D	N	W	Q	Y	I	L	D	V	C	D	L	V	K	E	D	P	E	D	N	G	Q	E	V	M	S	L	I	E	K	R	L	E	Q	Q	D	A	N	V	I	L	R	T	L	S	L	T	V	S	L	A	E	N	C	G	S	R	L
Query Conservation
Alig confidence						.	.																																	.
Template Conservation						.	.																																	.
Template Sequence		M	F	R	S	.	.	S	F	C	K	N	L	E	N	A	T	S	H	L	R	L	E	P	D	W	P	S	I	L	L	I	C	D	E	I	N	Q	K	.	D	V	T	P	K	N	A	F	A	A	I	K	K	K	M	N	S	P	N	P	H	S	S	C	Y	S	L	L	V	L	E	S	I	V	K	N	C	G	A	P	V
Template Known Secondary structure					S	.	.												T	T		S	S															T	T	.	S	S														T		S	S																		S
Template Predicted Secondary structure						.	.																																	.
Template SS confidence
		1	.	.	.			.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	E	I	S	S	K	N	F	T	S	L	L	Y	A	L	I	E	S	H	S	V	H	I	T	L	K	K	A	V	T	D	V	V	K	Q	L	S	D	S	F	K	D	D	P	S	L	R	A	M	G	D	L	Y	D	K	I	K	R	K	A	P	Y	L	V	Q	P	N	V	P	E	K	H	N	M	S	T	Q	A	D
Query Conservation
Alig confidence																			.																																																				.	.	.	.	.	.	.
Template Conservation																			.																																																				.	.	.	.	.	.	.
Template Sequence		H	E	E	V	F	T	K	E	N	C	E	M	F	S	S	F	L	.	E	S	T	P	H	E	N	V	R	Q	K	M	L	E	L	V	Q	T	W	A	Y	A	F	R	S	S	D	K	Y	Q	A	I	K	D	T	M	T	I	L	K	A	K	G	H	T	F	P	E	L	R	E	.	.	.	.	.	.	.	M	F	T	A
Template Known Secondary structure						S	S												.				S																			T	T	T		S	S														T	T									.	.	.	.	.	.	.
Template Predicted Secondary structure																			.																																																				.	.	.	.	.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.		.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.								.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	S	D	D	E	E	L	Q	K	A	L	K	M	S	L	F	E	Y	E	K	Q	K	K	L	Q	E	Q	E	K	E	S	A	E	V	L	P	Q	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	T	A	P	N	W	A	D	G	R	V	C	H	R	C	R	V	E	F	T	F	T	N	R	K	H	H	C	R	N	C	G	Q	V	F	C	G	Q
Template Known Secondary structure		S									S	B		T	T	T			B			S	S	S						T	T	T						S	T
Template Predicted Secondary structure
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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