Return to main results Retrieve Phyre Job Id

Job DescriptionO43137
Confidence2.76%DateMon Jul 2 19:10:22 BST 2012
Rank47Aligned Residues11
% Identity55%Templatec2k98A_
PDB info PDB header:antimicrobial proteinChain: A: PDB Molecule:msi-594; PDBTitle: helical hairpin structure of potent antimicrobial peptide2 msi-594 in the presence of lipopolysaccharide micelle
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   32.......40..
Predicted Secondary structure 
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Query Sequence  GYQEFLKKQEK
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Template Sequence  GIGKFLKKAKK
Template Known Secondary structure 
TTS
Template Predicted Secondary structure 
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   1........10.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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