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Job DescriptionO14455
Confidence2.96%DateMon Jul 2 19:10:21 BST 2012
Rank37Aligned Residues18
% Identity6%Templatec3l2tB_
PDB info PDB header:recombination/dnaChain: B: PDB Molecule:integrase; PDBTitle: crystal structure of the prototype foamy virus (pfv) intasome in2 complex with magnesium and mk0518 (raltegravir)
Resolution2.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   37..40.........50....
Predicted Secondary structure 


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Query Sequence  TKFVRSLVREIAGLSPYE
Query Conservation     

 




 
 



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Template Conservation      
       
 

 
Template Sequence  QLALNNTYSPVLKYTPHQ
Template Known Secondary structure  TS

TTTT

Template Predicted Secondary structure 






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   250.........260.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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