Return to main results Retrieve Phyre Job Id

Job DescriptionO14455
Confidence100.00%DateMon Jul 2 19:10:21 BST 2012
Rank3Aligned Residues67
% Identity46%Templatec3iz5k_
PDB info PDB header:ribosomeChain: K: PDB Molecule:60s ribosomal protein l13a (l13p); PDBTitle: localization of the large subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome
Resolution5.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   33......40.........50.........60.........70.........80.........90.........
Predicted Secondary structure 











Query SS confidence 


































































Query Sequence  ASNRTKFVRSLVREIAGLSPYERRLIDLIRNSGEKRARKVAKKRLGSFTRAKAKVEEMNNIIAASRR
Query Conservation   


   

 




 
 





  



  















 


 




  
    

Alig confidence 


































































Template Conservation   


   

 




 
 





 




  















 


 




  
    
 
Template Sequence  GTKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRS
Template Known Secondary structure 
TTTSS
STT

SSS

STSS


Template Predicted Secondary structure 







Template SS confidence 


































































   36...40.........50.........60.........70.........80.........90.........100..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions