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Job DescriptionP36006
Confidence100.00%DateMon Jul 2 19:17:52 BST 2012
Rank23Aligned Residues578
% Identity38%Templated1mnda2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Motor proteins
Resolution2.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   20.........30.........40.........50.........60.........70.........80.........90.........
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Query Sequence  SAKIKKATFDANKKKEVGISDLTLLSKISDESINENLKKRFKNGIIYTYIGHVLISVNPFRDLGIYTNAVLESYKGKNRL
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Template Sequence  KVKQTVSDKRRNPIKFDGVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRN
Template Known Secondary structure  S











TTSTT
SBGGG
SS

TT

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SS

S

STT

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   16...20.........30.........40.........50.........60.........70.........80.........90.....
 
   100.........110.........120.........130.........140.........150.........160.........170.........
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Query Sequence  EVPPHVFAIAESMYYNLKSYNENQCVIISGESGAGKTEAAKRIMQYIAAASNSHSESIGKIKDMVLATNPLLESFGCAKT
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Template Sequence  EVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGV. . . . . . . LEQQILQANPILEAFGNAKT
Template Known Secondary structure  TS






B
STTSST

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   150.........160.........170.........180.........190.........200.. .......210.........220..
 
   180.........190.........200.........210.........220.........230.........240.........250.........
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Query Sequence  LRNNNSSRHGKYLEIKFNSQFEPCAGNITNYLLEKQRVVGQIKNERNFHIFYQFTKGASDTYKQMFGVQMPEQYIYTAAA
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Template Sequence  TRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEKSRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQS
Template Known Secondary structure  TTS
SSS





TT

S


TT


TTS
TTTTTS
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   231........240.........250.........260.........270.........280.........290.........300.........310
 
   260.........270.........280.........290.........300.........310.........320.........330.........
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Query Sequence  GCTTADTIDDVKDYEGTLEAMRTIGLVQEEQDQIFRMLAAILWIGNISFIENEEGNAQVGDTSVTDFVAYLLQVDASLLV
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Template Sequence  GCVDIKGVSDEDEFKITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKGAGEGAVLKDKTALNAASTVFGVNPSVLE
Template Known Secondary structure  S
S

TT

TT

TT


TTSSS
S

TTT

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   311........320.........330.........340.........350.........360.........370.........380.........390
 
   340.........350.........360.........370.........380.........390.........400.........410.........
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Query Sequence  KCLVERIMQTSHGMKRGSVYHVPLNPVQATAVRDALAKAIYNNLFDWIVDRVNVSLQAFPGADKSIGILDIYGFEIFEHN
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Template Sequence  KALMEPRILA. . . . . GRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVLCSRA. . AYFIGVLDISGFEIFKVN
Template Known Secondary structure  S
S.....SS








..S






SS
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   391........400 .........410.........420.........430.........440..... ....450.........460...
 
   420.........430.........440.........450.........460.........470.........480.........490.........
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Query Sequence  SFEQICINYVNEKLQQIFIQLTLKAEQETYEREKIKWTPIKYFDNKVVCDLIEAKNPPGILAAMNDSIATAHADSNAADQ
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Template Sequence  SFEQLCINYTNEKLQQFFNHHM. . . . . . . . . . . . . . . . . . . . . DSQATIDLIDGRQPPGILALLDEQSVF. . . . PNATDN
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SSS

T
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   465....470.........480...... ...490.........500.........510... ......
 
   500...... ...510.... .....520.........530.........540.........550.........560.........570....
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Query Sequence  AFAQRLN. LFNSNPYF. . . . ELRANKFVIKHYAGDVTYDINGITDKNKDQLQKDLIELIGTTTNTFLSTIFPDDVDKDSK
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Template Sequence  TLITKLHSHFSKKNAKYEEPRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDP. . . NIA
Template Known Secondary structure  TTT
TT

TT
SS


SS




TT



TT
S

T...TTT
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   542.......550.........560.........570.........580.........590.........600.........610..... ...
 
   575....580.........590.........600.........610.........620.........630.........
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Query Sequence  RRPPTAGDKIIKSANELVETLSKAEPSYIRTIKPNQTKSPNDYDDHQVLHQVKYLGLQENVRIRR
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Template Sequence  SRFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEIRITRK
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TTS



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   619620.........630.........640.........650.........660.........670.........680...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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