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Job DescriptionP36006
Confidence100.00%DateMon Jul 2 19:17:52 BST 2012
Rank21Aligned Residues630
% Identity37%Templated1br2a2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Motor proteins
Resolution2.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   32.......40.........50.........60.........70.........80.........90.........100.........110.
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Query Sequence  KKKEVGISDLTLLSKISDESINENLKKRFKNGIIYTYIGHVLISVNPFRDLGIYTNAVLESYKGKNRLEVPPHVFAIAES
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Template Sequence  PPKFSKVEDMAELTCLNEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLPIYSEKIIDMYKGKKRHEMPPHIYAIADT
Template Known Secondary structure 
GGGTT
SBTTS
SS
STT


SSS

SS

TT

TTT

GGGS


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   80.........90.........100.........110.........120.........130.........140.........150.........
 
   112.......120.........130.........140.........150.........160.........170.........180.........190.
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Query Sequence  MYYNLKSYNENQCVIISGESGAGKTEAAKRIMQYIAAASNSHSESIGKIKDMVLATNPLLESFGCAKTLRNNNSSRHGKY
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Template Sequence  AYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAVVASG. . . . . . ELEKQLLQANPILEAFGNAKTVKNDNSSRFGKF
Template Known Secondary structure  T


STTSS

......TT

SS
TTSS
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   160.........170.........180.........190.........200 .........210.........220.........230...
 
   192.......200.........210.........220.........230.........240.........250.........260.........270.
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Query Sequence  LEIKFNSQFEPCAGNITNYLLEKQRVVGQIKNERNFHIFYQFTKGASDTYKQMFGVQMPEQYIYTAAAGCTTADTIDDVK
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Template Sequence  IRINFDVTGYIVGANIETYLLEKSRAIRQAKDERTFHIFYYLIAGASEQMRNDLLLEGFNNYTFLSN. GHVPIPAQQDDE
Template Known Secondary structure 
TTS



GGGGT


TT


B

TTTT


TTT
TTSTT.S



SS

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   252.......260.........270.........280.........290.........300.........310........ .320.........330
 
   272.......280.........290.........300.........310.........320.........330.........340.........350.
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Query Sequence  DYEGTLEAMRTIGLVQEEQDQIFRMLAAILWIGNISFIENEEGNAQVGDTSVTDFVAYLLQVDASLLVKCLVERIMQTSH
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Template Sequence  MFQETLEAMTIMGFTEEEQTSILRVVSSVLQLGNIVF. . . KKEQASMPDNTAAQKVCHLMGINVTDFTRSILTPK. . . . .
Template Known Secondary structure  T




...B



B
S

T




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   331........340.........350.........360....... ..370.........380.........390.........400..
 
   352.......360.........370.........380.........390.........400.........410.........420.........430.
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Query Sequence  GMKRGSVYHVPLNPVQATAVRDALAKAIYNNLFDWIVDRVNVSLQAFPGADKSIGILDIYGFEIFEHNSFEQICINYVNE
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Template Sequence  . . . . . . . . . . AQTKEQADFAIEALAKAKFERLFRWILTRVNKAL. . . . . DASFLGILDIAGFEIFEINSFEQLCINYTNE
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SSB
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   417..420.........430.........440.........450 .........460.........470.........480.
 
   432.......440.........450.........460. ........470.... .....480.........490.........500...... ..
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Query Sequence  KLQQIFIQLTLKAEQETYEREKIKWTPIKY. FDNKVVCDLIEAK. NPPGILAAMNDSIATAHADSNAADQAFAQRLN. LF
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Template Sequence  KLQQLFNHTMFILEQEEYQREGIEWNFIDFGLDLQPCIELIERPTNPPGVLALLDEEC. . . . . . . . ATDTSFVEKLIQEQ
Template Known Secondary structure  TT













SSS


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T
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   488.490.........500.........510.........520.........530.........540..... ....550.........
 
   509510.........520.........530.........540.........550.........560.........570.........580........
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Query Sequence  NSNPYFELRANKFVIKHYAGDVTYDINGITDKNKDQLQKDLIELIGTTTNTFLSTIFPDDVDKDSKRRPPTAGDKIIKSA
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Template Sequence  GNHAKFQKSKTEFCILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSDKFVADLW. . . . . . . . . . . KRTVGQLYKEQL
Template Known Secondary structure  TTSTT


TT
TT



T
SST...........


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   564.....570.........580.........590.........600.........610.........620 .........630..
 
   589590.........600.........610.........620.........630.........640.........650.........660........
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Query Sequence  NELVETLSKAEPSYIRTIKPNQTKSPNDYDDHQVLHQVKYLGLQENVRIRRAGFAYRQTFEKFVERFYLLSPDCSYAGDY
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Template Sequence  TKLMTTLRNTNPNFVRCIIPNHEKRAGKLDAHLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILAANA. . . . IP
Template Known Secondary structure  TS


SS

TT


TTS

GGGGTTS....S
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   668.670.........680.........690.........700.........710.........720.........730.........740. ..
 
   669670.........680.........690.........700.........710.....
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Query Sequence  TWDGDTLEAVKLILRDAMIPEKEFQLGVTSVFIKTPESLFALEDMRD
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Template Sequence  KGFMDGKQACILMIKALELDPNLYRIGQSKIFFRT. GVLAHLEEERD
Template Known Secondary structure  SS


T

GGG
SS
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   744.....750.........760.........770........ .780.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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