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Job DescriptionP36006
Confidence88.50%DateMon Jul 2 19:17:52 BST 2012
Rank272Aligned Residues93
% Identity17%Templatec3hqdB_
PDB info PDB header:motor proteinChain: B: PDB Molecule:kinesin-like protein kif11; PDBTitle: human kinesin eg5 motor domain in complex with amppnp and2 mg2+
Resolution2.19 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   104.....110.........120.........130......... 140.........
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Query Sequence  HVFAIAESMYYNLKSYNENQCVIISGESGAGKTEAA. . . . . . . . . . . . . . . . . . KRIMQYIAAA. . . . . . . . . . . . . . . .
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Template Sequence  DVYRSVVCPILDEVIMGYNCTIFAYGQTGTGKTFTMEGERSPNEEYTWEEDPLAGIIPRTLHQIFEKLTDNGTEFSVKVS
Template Known Secondary structure  TT

STTSSTB


TT

S
GGG
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   80.........90.........100.........110.........120.........130.........140.........150.........
 
   150.........160.........170.........180.........190..
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . SNSHSESIGKIKDMVLATNPLLESFGCAKTLRNNNSSRHGKYL
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Template Sequence  LLEIYNEELFDLLNPSSDVSERLQMFDDPRNKRGVIIKGLEEITVHNKDEVYQILEKGAAKRTTAATLMNAYSSRSHSVF
Template Known Secondary structure 
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SSS
S

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B
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T



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   160.........170.........180.........190.........200.........210.........220.........230.........
 
   193...
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Query Sequence  EIKF
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Template Sequence  SVTI
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   240...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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