Job Description P36006 Confidence 95.57% Date Mon Jul 2 19:17:52 BST 2012 Rank 34 Aligned Residues 56 % Identity 20% Template c1sxjC_ PDB info PDB header:replication Chain: C: PDB Molecule:activator 1 40 kda subunit; PDBTitle: crystal structure of the eukaryotic clamp loader (replication factor2 c, rfc) bound to the dna sliding clamp (proliferating cell nuclear3 antigen, pcna) Resolution 2.85 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	E	S	Y	K	G	K	N	R	L	E	V	P	P	H	V	F	A	I	A	E	S	M	Y	Y	N	L	K	S	Y	N	E	N	Q	C	V	I	I	S	G	E	S	G	A	G	K	T	E	A	A	K	R	I	M	Q	Y	I
Query Conservation
Alig confidence																						.	.
Template Conservation																						.	.
Template Sequence		W	V	E	K	Y	R	P	E	T	L	D	E	V	Y	G	Q	N	E	V	I	.	.	T	T	V	R	K	F	V	D	E	G	K	L	P	H	L	L	F	Y	G	P	P	G	T	G	K	T	S	T	I	V	A	L	A	R	E	I
Template Known Secondary structure						T			S	S	G	G	G			S						.	.									T	T										S	S	S	S	S
Template Predicted Secondary structure																						.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.			.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions