Return to main results Retrieve Phyre Job Id

Job DescriptionO14467
Confidence45.18%DateMon Jul 2 19:10:22 BST 2012
Rank338Aligned Residues42
% Identity14%Templatec3fm5D_
PDB info PDB header:transcription regulatorChain: D: PDB Molecule:transcriptional regulator; PDBTitle: x-ray crystal structure of transcriptional regulator (marr family)2 from rhodococcus sp. rha1
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   72.......80.........90. ........100.........110...
Predicted Secondary structure 






.






Query SS confidence 



















.





















Query Sequence  VKPKKLDPNVGRAISRARTD. KKMSQKDLATKINEKPTVVNDY
Query Conservation    
  
   

  
   
  . 



 


   


   

  
Alig confidence 



















.





















Template Conservation 
   


  
  

  
       
   

        


  
Template Sequence  LVPTGLRVRSYSVLVLACEQAEGVNQRGVAATXGLDPSQIVGL
Template Known Secondary structure  GGGT

TSSS
T

Template Predicted Secondary structure 












Template SS confidence 










































   30.........40.........50.........60.........70..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions