Job Description O14467 Confidence 93.46% Date Mon Jul 2 19:10:22 BST 2012 Rank 91 Aligned Residues 74 % Identity 8% Template c2h8rA_ PDB info PDB header:transcription activator/dna Chain: A: PDB Molecule:hepatocyte nuclear factor 1-beta; PDBTitle: hepatocyte nuclear factor 1b bound to dna: mody5 gene2 product Resolution 3.20 Å

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		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	P	N	V	G	R	A	I	S	R	A	R	T	D	K	K	M	S	Q	K	D	L	A	T	K	I	N	E	K	P	T	V	V	N	D	Y	E	A	A	R	A	I	P	N	Q	Q	V	L	S	K	L	E	R	A	L	G	V	K	L	R	G	N	N	I	G	S	P	L	G	A	P	K	K	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	W	R	A	A	K	M	I	K	G	Y	M	Q	Q	H	N	I	P	Q	R	E	V	V	D	V	T	G	L	N	Q	S	H	L	S	Q	H	L	N	K	G	T	P	M	K	T	Q	K	R	A	A	L	Y	T	W	Y	V	R	K	Q	R	E	I	L	R	Q	F	N	Q	T	V	M	R	R	N
Template Known Secondary structure																	T											T											T	T																										T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions