Job Description O14467 Confidence 99.44% Date Mon Jul 2 19:10:22 BST 2012 Rank 32 Aligned Residues 62 % Identity 8% Template c2ebyA_ PDB info PDB header:transcription Chain: A: PDB Molecule:putative hth-type transcriptional regulator ybaq; PDBTitle: crystal structure of a hypothetical protein from e. coli Resolution 2.25 Å

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		78	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		D	P	N	V	G	R	A	I	S	.	R	A	R	T	D	K	K	M	S	Q	K	D	L	A	T	K	I	N	E	K	P	T	V	V	N	D	Y	E	A	A	R	A	I	P	N	Q	Q	V	L	S	K	L	E	R	A	L	G	V	K	L	R	G	N
Query Conservation											.
Alig confidence											.
Template Conservation
Template Sequence		P	T	T	P	G	D	I	L	L	Y	E	Y	L	E	P	L	D	L	K	I	N	E	L	A	E	L	L	H	V	H	R	N	S	V	S	A	L	I	N	N	N	R	K	L	T	T	E	M	A	F	R	L	A	K	V	F	D	T	T	V	D	F	W
Template Known Secondary structure													T	T	T	T	T	T											T	S										T	T	S	S															T
Template Predicted Secondary structure
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions